Colossoma macropomum (tambaqui): 118822415
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Entry
118822415 CDS
T09004
Symbol
her9
Name
(RefSeq) hairy-related 9 isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03460
Fanconi anemia pathway
cmao04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
118822415 (her9)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118822415 (her9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118822415 (her9)
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118822415 (her9)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
118822415 (her9)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
118822415 (her9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_IRO3
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
118822415
NCBI-ProteinID:
XP_036447348
LinkDB
All DBs
Position
Unknown
AA seq
288 aa
AA seq
DB search
MPADSMEKQTASPIAGAPASGSHTPDKPKSASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAAMSTDAAVLSKYRAGFNECVNE
VTRFLSTCEGVSAEVRSRLLGHLSACLAQVIAASGYSHPAHAAQQAHVAAQQPLHAQLPA
SAKLGGPSEAASPKVFGGFQLVPATDGQFAFLVPSPAAFGSATAPVIPLYANAGLPLAVS
AGPVHASAAPTAASPVQGMTCFNGAARAASPVGVSAGPESSEPVWRPW
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgacagcatggagaaacagaccgcatctcccatcgccggtgcccccgcgagc
ggatcccacacgccggacaagccaaagagtgccagcgagcacagaaagtcttcaaagccc
atcatggagaaaaggcgcagagccagaatcaacgaaagcctggggcagctgaagaccctc
attctggacgctcttaaaaaagatagctccagacactccaaactggagaaagctgacatt
ctggagatgacagtgaagcacctgaggaacctgcagcgcgcgcagatgaccgcagcgatg
tcaacagacgcggccgtgctgagcaagtaccgcgcgggcttcaacgaatgcgtgaacgag
gtgacgcgcttcttgtccacttgcgaaggcgtgagcgcggaggtgcgctcaagactcctc
ggacacctgtccgcatgcctggcgcaggtcatagcggccagcggctactcgcacccagcg
cacgcggcccagcaggcgcacgtcgccgcgcagcagcccctgcacgcgcagctgcccgcc
agcgccaagctcggaggcccgtccgaagcagcgtcgcccaaagtgttcggcggcttccag
ctcgtgcccgccaccgacggacagttcgccttcctcgtgcccagccccgccgcttttggc
tccgccacagcaccggtcatcccgctctacgccaacgcggggctgccgctcgccgtcagc
gcggggcccgtgcacgccagcgccgcgcccacagccgcctctccggtccagggcatgacc
tgcttcaacggcgcggccagagccgccagccccgtgggagtcagcgcggggcccgagagc
agcgagcccgtgtggcggccctggtag
DBGET
integrated database retrieval system