Colossoma macropomum (tambaqui): 118822505
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Entry
118822505 CDS
T09004
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118822505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmao03021
]
118822505
03036 Chromosome and associated proteins [BR:
cmao03036
]
118822505
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118822505
Coactivators
SAGA/TFTC/STAGA complex
118822505
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118822505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
EEP_ig-like
CGI-121
Motif
Other DBs
NCBI-GeneID:
118822505
NCBI-ProteinID:
XP_036447486
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MAAGPELLDDVFFNAEVDEKTVSDVVGSLESQLVGAGPGKLAGRLQTAGGHIGGSAGGNI
GEIRDNNNMGLGQENQRAGARVPAGGINDARVQPKGVDAGAVMPGNLKPGLGAPSAASTA
NHMPGSGQRGTSAVAALNGSNVVVNSHGSVGVGPFSSASSALSPVSSIVSTGTVVNNGPG
CMPKGQTTPSGTVIQTSLMNTATVISAQTSCLTAGPTVALVRPPMQTQVTVTAPNGTGSL
ALSGGVNAVHLPTSNTPGALSLSSTGQVNKADSAKTLIQTVVQTPASVAQPIRGHIMQSG
SRTPVPAAVGANPGGIRAIAPQVLAPRVPQPQQSQPSVHNIQLPPGMVLVRSESGQLLMI
HQQTLAQMQAQSQGAMATRPTTPTSTPPVHITSVQAPGTPLITRQVAPTTIIKQASPVPA
AVQPTTALQRPPLLQNTIMLGGTTAPPVGTPPPGQVGVAPTQRVTTAGTTPAPATTETLE
NVKKCKNFLSTLIKLASSGKQSSETAANVKELVKNLLEGKLEAEDFTSRLYKELNSSPQP
YLVPFLKRSLPALRQMTPDSEAFIQQSQLQQPSAPPSSTALTAAVLGGSSSAQRPTAPPT
TPSTAIAKTSSITSITSTTTPTTTSPHQPVISLSQNAPSKPNLIVQPPQQQLGTLVRGPQ
VNLAQTPMVTLRPGQARVLSPQTVVKTQTLPSGSMLKTAVSVGNKLLSVSGPQSLPSAVQ
KTKLKDAGSGSFRDDDDINDVASMAGVNLSEESDRILATNSELVGVVTRSCKDETFLYTS
SLQRRILEIGKKYGISEVGSDVINIVSHATQQRLQNLLEKVTQVAQQKNVHYKEDERHEQ
ISDVRAQLKFFEQLDQMEKQKKEEQEREILMKAAKSRSRQEDPEQLRLKQKAKEMQQQEL
AQMRQRDANLTALAAIGPRKKRKVDTSASGSGPEGVSSVSAGSVAAGSGGSRQFPRQRIT
RVNLRDLLFCLENERETSHSHLLYKAFLK
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggccccgagttgttggacgatgttttcttcaacgccgaggtggatgagaag
actgtaagcgacgtcgtgggctctttggagtcccagctcgtcggcgctggacccggtaag
ctcgccggcaggcttcagaccgctggcgggcacatcggaggctcagccgggggcaatatc
ggagaaattcgcgacaacaacaacatgggactggggcaggagaaccagagagcaggggca
agggtgccagctggtggcatcaatgatgccagagtgcaacctaaaggtgtggatgctgga
gcagttatgccaggaaacctcaaacctggacttggagccccttcagcagcatccacggca
aaccacatgccgggcagcgggcagagagggacgtctgcagtcgcagctctgaatggaagt
aatgtggtagtgaactctcacggttcagtgggtgttggacctttctctagcgcatcatcg
gcactgtcgccagtctccagcattgtgtcgaccggaacagtggtgaataacggacctggc
tgcatgcctaaaggacagaccacgccttcgggcacggtcattcagacctctttgatgaac
actgccactgtgatttcggcgcaaacttcctgcctgactgcaggacccaccgttgcactc
gtgaggccgcctatgcaaacccaagttacggttacggcaccgaatggcactggcagcttg
gctttaagcggaggagtaaacgctgtgcacctgcccacatcaaatacgccaggagcgtta
agtttaagctcaacaggccaggttaacaaagcagactcggctaaaactcttattcagacg
gtggttcaaactcctgcatcagttgcacagcctattagaggccacataatgcaaagcggg
agcaggactccggtgccagcggccgttggagccaatcctggagggattcgggccatagcg
ccacaggttttagcgccgagagtaccgcagccccagcagagtcagcctagtgtccacaat
atccagctcccaccagggatggttctggtgcgcagtgagagtggtcagttgttgatgatc
catcagcagacattggcccagatgcaggcccagtctcagggtgccatggcaacaagaccc
acaacccccaccagcactccacctgtccacattacctctgtacaggcccctgggacgccg
ttaataacacggcaggtggcccccaccactataatcaaacaggcttctcctgttcctgcg
gctgttcagcccaccactgcactccagagacccccgctactgcagaatactataatgttg
ggggggacaacggcaccccctgttggcacaccaccaccagggcaggtaggggtggcccca
actcaaagagtgaccactgctggaaccacgccagcccccgccaccacggaaacattagaa
aatgtgaaaaagtgtaagaacttcttgtccacgttgataaagttggcatccagtgggaaa
caatcctcagaaacggcggctaatgtgaaggagctggtcaaaaatctcctggagggaaaa
cttgaagcagaagattttaccagcagactgtacaaagagttaaactcctcacctcaaccc
tacctcgtgcctttccttaagaggagtcttcctgctctgcgtcagatgactccagactca
gaagcatttatccagcagagtcagctccagcagccttcggctccgccttcctccaccgcg
ctcaccgccgccgtgctggggggatcttcgtccgcacagcgtcccacagccccgcccacg
acgccctctacagctatcgccaagaccagctccatcacctcaatcacctccactaccacc
cccaccaccacctcaccccaccagcctgtcatcagcctgtcgcaaaacgcaccgagcaaa
cccaacctgatcgtccagccaccgcagcaacagctggggacgctggtgagagggccacag
gtgaacctggcccagactcccatggtcacgctgagacctggtcaggcacgtgtgctctct
cctcagactgtagtcaaaacgcagacgcttccctcaggctctatgctgaagactgcggtg
tctgtggggaataaattattatctgtgtctgggcctcagtctctgccctctgcagtccag
aagacaaaactgaaagatgcaggaagcggctccttcagggacgatgacgacattaatgac
gtggcctccatggccggagttaacctgtctgaagaaagcgatcgaattctggccactaac
tctgagctggtgggggtggtgactcgctcatgtaaagatgaaactttcctctacaccagc
tcactgcagcgcaggatactggaaataggtaaaaaatacggcatctcagaggtgggcagt
gacgtcatcaacatcgtttctcatgctactcagcagaggctgcagaaccttctagaaaaa
gtgactcaggtggctcagcagaagaacgtccattataaggaggatgagcggcacgagcag
atcagcgatgttcgagctcagttgaagttcttcgagcagctggatcagatggagaaacag
aaaaaagaagaacaagagagagagatcctgatgaaagctgcgaagtcacgatcgagacaa
gaagacccggagcaattacggctgaaacaaaaagccaaagagatgcagcagcaggaatta
gctcagatgagacagagagatgcgaacctgacggcactggctgctatcggccctagaaag
aagcggaaagtggacacttcagccagcggatcaggaccagagggcgtcagctctgtttct
gctggttcggtggcggcgggctccggaggatcgcggcagtttccccggcagcgcatcact
cgagtcaacctcagggacctgctcttctgcctggagaatgaacgagaaaccagccactct
cacctgctttataaagctttcctcaaataa
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integrated database retrieval system
