Colossoma macropomum (tambaqui): 118822709
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Entry
118822709 CDS
T09004
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118822709 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmao01009
]
118822709 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118822709 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
cmao03029
]
118822709 (rb1cc1)
Protein phosphatases and associated proteins [BR:
cmao01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118822709 (rb1cc1)
Membrane trafficking [BR:
cmao04131
]
Autophagy
Autophagosome formation proteins
ULK complex
118822709 (rb1cc1)
Mitochondrial biogenesis [BR:
cmao03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
118822709 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
118822709
NCBI-ProteinID:
XP_036447840
LinkDB
All DBs
Position
Unknown
AA seq
1626 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVLDLKHAIQTKYKIATQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILCDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLWKFDMAYTNYQQ
NFEDIKLKLTKLGTAVSVMAKIPLLECLTRHSYRESLEKSSSPRPRTEEEEDADNDEVGG
EMSTQSAILCHPDGQRNPKSPTLVSASGEAAAQALPPSSQDRLEGSRGLQEALEEEQEQE
AMERGATPSFNVTLLDWINVQDRPNDVEAVVRKCFDSINRLDPRIIQPFLADCRDTITKL
DNQNMKAIKGLEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCL
SHANQLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLR
LLTELLERVRVVEALSTVPQMYCLAVVEVVRRKMFVKHYREWANALVKDGKNLYEAEKAK
RETFGKLFRKSFLRNRLFRGLDSWPPLSFCTRKPRRFDFELPDISLTDLQYLKSCCPAEV
QPFLRVPSLCDFEPLNHHVEALHQLVQAAQSVDEMSQTITDLLSELKVSGSQSAQRPIAL
TPRSESRTETTPTSPKVPSSLTLQSPPCQPLPLPAPLEDLSPDSIDAHTFDFETIGHPNM
DPVLQQGSLDLDSLAESPESDFMSAVNEFVIEENVMSPNPISDPTSPEMMVESLYSSVIN
AIDSKRIQDTTTLERENSRITVLKLTVDRYRSAAEESQSNFRKIKDDLSHFRGLVLKEQR
DFGFALKKMSSDMHSIVNSIKYCHEEELKEMHQNELENLRADHKKQILDLNQELEENRNI
VRDVQRAMLELEGLVERKEKELAQLEGERERSLEELRSSHQQAVQKLEKKVSEQNEVLRD
ALLSKDALASQLESLHVEIECSQKKIRQEMENSEKNRLQELEARLSQEHQALLETLKQDN
QNALDALVQENQAKLKELTESYSVERKECEGRFKDYEARIAELADARCKLEVEMALKEAE
TEELRLQDEEARAQREEVLKAEMMSQTSSLQKQVNTLMQQLQKKNEEYELGLAELRALMR
LEKDHCISELVDRHEEESTLLRHEFSVLKQKSQDAEKDLEERLLKIQHEQDVQLAALQKE
HEEEQRAFQEKEQDLQTTISDLQAENALLSGRLEHERQEAQRKVEEEKEAAKETLNHALK
DFELQKEELEARLLGKIKLLENQLEERQSTEKVVTAGGQGEVMLEADLDNTLQQRLEEER
ASLLAKLELLEKKKNEELQNLKTSLIAEQQTNFNTVLTREKLKKEQIINELSEKLKEVTL
QQEKDKSLIETLSEDRASILQEKKQLEEELNRLRCTALVSSTFVVPSPVPAVAEVPGACG
PSPVEAPALPALDSERLVSVATLRDDDRVDSAVEASMMTVHDNTLMLSEEKQRILILERT
LHMKEEENKRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVGP
TLYFLHSESLTALDLKPVTGATRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAV
PWNKKV
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggaagcacactgacatttgataccgaactc
gcagtccaaacggttttggaccttaaacatgccatccaaaccaagtacaagattgccact
cagcaccaagtgctggtggttaatggtggagagtgcatggtggcagaaaggagagtctgc
agttacagcgcaggcacggacaccaatcccatctttttgttcaacaaagagatgattttg
tgtgaccgtgcaccaacaatccccaaaaccaccttctctattgagaatgagatggaactg
aaggtggaggagtctctcatgatgcctgctgtgtttcacaccgttgcctcacggacacaa
cttgctgtggaaatgtttgaagttgccaagaagctctgttcattctgtgaacgcctggtc
catgacgaacaccttcagcatcagggttgggccgccatcatggccaacttggacgactgt
acattgtcctatcaaaaactgctctggaaatttgatatggcgtacacgaattatcaacag
aattttgaagatattaaactaaaactcaccaagcttggaacagctgtttctgtcatggct
aagatccccttgctcgagtgcctgacccgccacagttacagagagagtctggagaagtcc
agctctccacgccccagaacagaggaggaagaggatgcggacaacgatgaagttggaggc
gaaatgtccacccagtctgccatcttgtgccacccagatggtcagcgcaaccccaaatcg
cccactttggtgtctgcttcgggagaggcggcggcacaggctttgccaccatcctcccag
gataggctggagggtagtcgtggcctgcaggaggcgctagaggaggaacaggagcaggag
gctatggagagaggagctactccctcctttaatgtcacactgctggactggattaatgtg
caggaccggcccaacgatgtggaggctgtagttagaaagtgctttgactccatcaaccga
cttgatccacgcattattcagccatttctagctgactgccgggacactattacaaaactg
gataatcaaaacatgaaggccatcaaggggcttgaagatcgattgtatgcacttgaccaa
atgatagccagctgcaaaaagctggtcaacgaacagaaggaacttgctcagggatttctg
gccaatcagaagagggctgaaaacctgaaagacacttcggtgctgccggacctgtgtctg
agtcacgccaaccagctgatgatcatgctgaccaatcacaggaagctgttggacatcaaa
cagaagtgcaccactgccaaacaggaactggccaacaacctgcaagtccgtctcaaatgg
tgctgttacgtgatgctccacgctgaccaggatggggagaagctgcaggccctcctcagg
ctgttgactgagctacttgagcgagtacgcgtggtagaggccctcagcactgtcccacag
atgtactgtctggccgtggtggaggtggtccgcaggaaaatgtttgtcaaacactacaga
gagtgggccaatgccctagttaaagatgggaaaaacctctatgaagctgaaaaggccaaa
agggaaacatttggcaagttattcagaaagtcattcctcagaaatcgcttgtttcgagga
cttgactcgtggcctcctttgtcattttgtactagaaagcctcgcaggtttgactttgag
cttccagacatctccctaactgacctgcagtatctgaagagctgctgtcctgctgaagtt
cagccttttctcagggttccatcactgtgtgactttgaacctctaaaccaccatgtggag
gcccttcaccagctagtgcaagcagctcagagtgtcgatgagatgtctcaaaccatcaca
gaccttctgagtgaactaaaggtttctgggagccaaagtgctcagagacccatagcatta
acccccaggtcggaaagcagaacagagaccacgcctacctcccctaaagtaccatcctcc
ctcactttgcagtctccaccctgtcagccacttccccttccagcccctttagaggatcta
tcacctgacagcatagatgcccacacatttgactttgaaaccataggacaccccaacatg
gatcctgtactccagcaaggttcgttggacctagactccctggcggagagcccagagtca
gacttcatgtctgcggtcaatgagtttgttattgaagagaatgtaatgtcgcccaatccc
atcagtgaccctacaagccctgagatgatggtggagtctctttactcctcagtcattaat
gctatagatagcaaacgcatccaagacaccaccacactggagagagagaactccagaatc
actgtcctcaagctgactgtggacaggtaccgttcagctgctgaggagtcgcagagtaac
ttcaggaaaattaaggatgacttgtcccacttccgtggtcttgttttaaaagagcaacga
gattttggctttgccttgaaaaagatgagctctgacatgcacagcatagtcaacagcatt
aaatactgtcatgaagaggaactgaaagagatgcaccagaatgagctagagaatctaaga
gcagaccacaaaaagcagatccttgatctcaaccaggagctggaagagaaccgcaacatt
gtgagggatgttcagcgggccatgcttgagttggaagggcttgtggagcgtaaggagaaa
gaactggctcagctggagggtgagagggagcgctcattggaggagttacggagcagccac
cagcaggctgtgcagaagctggagaagaaggtctcggagcagaacgaggtgctccgggat
gcgctgctgtccaaagatgctcttgccagccagctggagagcctgcacgtcgagatagaa
tgtagccagaagaaaatacggcaggagatggagaattccgagaagaaccgtctccaagag
cttgaggcccgactgagtcaggaacaccaagccctgctggaaaccctgaaacaggacaac
cagaatgccctggacgccctggttcaggagaaccaagccaaactgaaggaactgacagag
tcgtactctgtagagcgaaaggagtgtgagggccgctttaaagactatgaggcccgcata
gctgaacttgctgacgctcgctgcaagctagaggtggagatggccctgaaagaggctgag
actgaagagctgcggctgcaggatgaggaggccagggcccagcgggaggaggtgctgaaa
gctgagatgatgtcgcagacatcatccctgcagaaacaggtgaacacattgatgcagcag
ttgcaaaagaagaatgaggagtatgagctgggccttgctgaactgcgagcgctcatgcgg
ctggaaaaggaccactgcatctcagagctggtggaccggcatgaggaggagagcacactg
ctccgtcatgagttctcggtgctcaagcagaagtcacaggacgccgagaaggaccttgag
gagcggctgttgaagatccagcatgagcaggatgtccagcttgctgctttgcagaaggaa
catgaggaggagcagagggctttccaggagaaagagcaggacttgcagaccaccattagt
gacttgcaggcagagaatgcacttttgtcaggaagattggagcatgagaggcaggaggcc
cagaggaaagtggaggaggagaaggaggctgctaaagagacattaaaccatgccttaaag
gactttgaactccagaaagaggagcttgaggcaagactcttaggaaaaattaaattactt
gaaaatcagcttgaagaaagacaatccactgaaaaagtggtaacagcaggtgggcagggt
gaggtgatgctggaagcagatctggacaacaccttgcagcagagactggaggaagagaga
gcttcactcttggccaagctggagctgttggagaagaagaagaatgaggagctgcagaac
ttaaaaacgtccctaatagctgagcagcagacaaatttcaacactgtactcacacgtgaa
aagctgaaaaaggagcagatcattaacgaactgagtgagaagctaaaggaagtgacgtta
cagcaggagaaggacaaaagtttgatcgagactctctctgaggaccgtgcctccatcctc
caagagaaaaaacagctagaggaggagctcaaccgcctccgatgcaccgcccttgtctcc
tccacctttgttgtgcccagccctgtccctgctgttgcagaggttcctggtgcctgcggt
ccctctcctgtagaagcccccgctctgcctgcgctggattctgaaagactggtatcagtg
gctacgctccgagatgatgacagagtcgactctgctgtagaggccagcatgatgaccgtg
catgacaacacattgatgctgtcagaagagaagcagcggatactaatactggaaaggaca
ttgcacatgaaggaagaggaaaacaagaggctcagccaaagactaatgtcacagagtatg
tcctctgtgtcctcgagacattcagagaaaattgctattcgagattttcaggttggcgat
ttggtcctcataattctagatgagaggcatgataattatgtactcttcacggtcggaccc
accctctacttcctgcactcggagtcgctcactgctctggacctcaagccagtaacaggg
gctacgaggcggccgtgggttttggggaaggtcatggagaaggaatattgccaggcaaaa
aaggcccaaaaccggttcaaagttcctctgggcaccaaattctaccgagtaaaagccgtg
ccatggaataagaaagtgtaa
DBGET
integrated database retrieval system
