Colossoma macropomum (tambaqui): 118822845
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Entry
118822845 CDS
T09004
Symbol
zgc:193690
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03013
Nucleocytoplasmic transport
cmao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118822845 (zgc:193690)
03015 mRNA surveillance pathway
118822845 (zgc:193690)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118822845 (zgc:193690)
Enzymes [BR:
cmao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118822845 (zgc:193690)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118822845 (zgc:193690)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Queuosine_synth
Motif
Other DBs
NCBI-GeneID:
118822845
NCBI-ProteinID:
XP_036448046
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MATDSWALAVDEQEAASKSIGALRIRERRVIPRAEANGMAKPSEDGDKSDEEEKEDRAAQ
SLLNKLIRSNLVNNTNQVEVLQRDPNSPLYSVKTFEELRLKPPLLQGVYGMGFNRPSKIQ
ENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPTNKWTQCLCISPTYELALQTG
KVVEQMGKFYPEVKLAYAVRGNKMERGSKIQEQIVIGTPGTVLDWFLKLKLMDPKKIRVF
VLDEADVMIATQGHQDQSIRIQRMLPKDCQMLLFSATFEDSVWKFAERIVPDPNVIKLKR
EEETLDTIKQYYVLCNNKEDKFSALCNIYGAITIAQAMIFCHTRKIAAWLAGQMSKEGHQ
VALLSGEMVIEQRAAVIERFREGKEKVLITTNVCARGIDVEQVSVVINFDLPLDKDGNPD
NETYLHRIGRTGRFGKRGLAINMVDSDHSMDVLKAIEKHFNKKILKLDTDDLDEIEKIAN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgactcgtgggctctggccgtggatgaacaagaagccgcctccaagtcgatt
ggagccctgcggattagagaaagacgagtcataccgagagccgaggccaatggaatggca
aaacctagcgaggatggtgacaaatctgatgaagaggaaaaagaggacagagctgcacag
tcactcctcaataaattaatcagaagcaatcttgtcaacaacacaaaccaagtggaggtt
cttcagagagatccaaattcacctctgtactcagtcaagacgtttgaagagctgcgactg
aaaccaccgcttctccaaggcgtgtatggaatgggcttcaacagaccctccaaaatccag
gaaaatgccctgcctatgatgctggcagaaccaccccagaacctgattgcccagtctcag
tccggcacgggcaaaactgctgcctttgtgttggccatgctgagccacgtcgaccccaca
aacaagtggacacagtgtttgtgcatttctccaacctatgagctcgccctgcagacaggc
aaagtggtggagcagatggggaagttctaccctgaagtgaaactggcgtacgccgttcga
ggcaataaaatggagcgaggcagtaagatccaggagcaaatagttatcggtactcctggc
accgtgctggattggttcctgaaactcaagctaatggaccccaagaagattcgagtgttt
gtgctggacgaggctgacgttatgatagccacacagggccatcaggaccagagcatccgc
attcagaggatgctgcccaaagactgccaaatgctgctcttctctgctacctttgaggac
tcagtgtggaagttcgctgagcggatcgttccagatcccaacgtaatcaaactgaaaagg
gaggaggaaaccctggacaccattaagcagtattatgtgctctgcaataataaagaggac
aagttttctgcactctgtaacatctatggggcaatcaccatcgcacaggctatgatcttc
tgccatactcgaaagatagcagcctggctggcagggcaaatgtctaaagaaggccaccag
gtggcactgctgagtggtgaaatggtgatcgagcaaagagcggctgtcattgaacgcttc
agagaaggcaaagagaaagtgctgataaccactaatgtgtgtgcaagaggcatcgatgtg
gagcaggtttctgtggtgatcaactttgatctgccactggataaagatggaaacccagac
aatgagacatacctccacaggatcggcaggacagggcgcttcggcaaacgaggactggcc
atcaacatggtggacagtgaccacagcatggatgttctcaaagcaattgagaagcatttc
aataagaaaatattgaagctggatacagatgatcttgacgaaattgaaaaaattgccaac
tga
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