Colossoma macropomum (tambaqui): 118822914
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Entry
118822914 CDS
T09004
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
KO
K12012
tripartite motif-containing protein 35
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118822914
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118822914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4_2
zf-RING_5
U-box
zf-RING_2
SPRY
Prok-RING_4
zf-RING_10
Fib_alpha
zf-Nse
Baculo_PEP_C
End3
DUF4200
zf-RING_6
Perilipin
Motif
Other DBs
NCBI-GeneID:
118822914
NCBI-ProteinID:
XP_036448135
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MVGYSSRIMHRAFGPKLSRNGLRSIPESRATVADSQLCCSDHYRRPKSESGVWTKGAVTE
KQHSSSWRKWLLKNPLSEEDFSCPVCCEIFRDPVVLSCSHSVCKTCLQKFWETKGSRECP
VCRRRSSKEYPPCNLVLKNVCEALLESRSQRSSAGSEVLCILHNEKLKLFCLDDQQSVCL
VCHLSKTHKNHNCCPIDEAVTEFKNKLKTALEPLQKNLKVLEEAKQDYDQTAAHIKMQAQ
HTERQIKEEFEKLHQFLRDEEAARIAALKEEEEQKSQMMRRKIEEMNGEISSLSDTIRNI
EKEMEAEDILFLQNFKSTEKQAQLKPKDPEKTSGALINVVKHLSNLKFRVWENMQEILQY
TPVTLDPNTAHPDLHLSVDLTAVENRKQRSSLPDNPERFDKWECVLGSEGFNSGTHCWDV
QVGDSHNWELGVIPESETRKRISFWDSVWSLDCYFSEYRIHCPGQSDLYLTPKKKLQRVR
VQLDWDRGKVTFTDLLTNTHLHTVTHTFSQRVLPYFWNWSVHPLRILPVKTSVTVEQHS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggtgggatattccagcaggataatgcaccgtgcctttgggcccaagttgtccagaaat
ggtttgaggagcattccagagagtagggctactgtggctgattctcaactgtgctgctct
gatcattacagacgtcctaaaagtgaaagtggagtttggactaaaggagccgttacagag
aaacagcacagcagcagttggaggaaatggctgctaaaaaaccctctttcagaagaagac
ttttcctgtcctgtgtgctgtgaaatcttcagggatcctgttgttctgtcgtgtagccac
agtgtgtgtaaaacctgtctgcagaagttctgggaaactaaggggtctagagaatgtcca
gtttgtagaagaagatcctctaaagaatatcctccctgtaaccttgtactgaagaatgtg
tgtgaggctcttctagagagcaggagtcagagatcttcagcagggtctgaggtgctctgc
attctgcacaatgagaaactcaaactcttctgtctggatgatcagcagtctgtgtgtttg
gtctgtcatctatcaaagacgcataaaaatcacaattgctgcccaatagatgaagctgtc
actgagtttaagaataaactcaagactgctttggagcctctacagaagaatctgaaagtc
ttagaggaagctaaacaagactatgaccaaacagcagctcacattaagatgcaggcccag
cacacagagaggcagataaaggaggagtttgagaagcttcaccagtttctaagagatgaa
gaagcagcaaggatagctgcactgaaggaggaagaggagcagaagagtcagatgatgagg
aggaagattgaggagatgaatggagaaatatcatctctttcagacacaatcagaaacata
gagaaggaaatggaagctgaggacattctgttcttacagaacttcaagtctacagagaaa
caagctcagctcaaaccaaaggatccagagaagacatcaggagctctgatcaatgtagtg
aaacacctttccaacctgaagttcagagtgtgggagaacatgcaggagattctccagtac
acccctgttactctggaccccaacactgcacatccagacctccacctgtccgttgatctc
actgctgtagaaaacaggaaacagagatcatcacttcctgataatccagagagatttgat
aagtgggagtgtgttctgggttctgagggttttaactcagggacacactgctgggacgtc
caggttggagacagtcataactgggaactgggtgtgataccagagtctgaaacaagaaaa
agaatctctttctgggattcagtgtggagtctggattgttattttagtgaatatcggata
cactgtccaggacagtcagatctctacctcacacctaaaaagaagctgcagagggtcaga
gtgcagctggactgggacagggggaaagtgaccttcactgatcttctaaccaacacacac
ctgcacactgtaacacacactttcagtcagcgagttttaccgtatttctggaattggtct
gttcatcctctgaggatcttaccagtgaagacgtcagtaacagtggaacagcacagttaa
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