Colossoma macropomum (tambaqui): 118823296
Help
Entry
118823296 CDS
T09004
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
KO
K11274
chromosome transmission fidelity protein 4
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmao03036
]
118823296 (wdhd1)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
118823296 (wdhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Ctf4_C
Beta-prop_WDR5
HMG_WDHD1
WD40
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
HMG_box
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
eIF2A
Beta-prop_SCAP
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
WD40_Gbeta
Beta-prop_IFT122_1st
Ge1_WD40
NBCH_WD40
Tricorn_2nd
KNTC1_N
Beta-prop_Nup120_160
PROPPIN
Motif
Other DBs
NCBI-GeneID:
118823296
NCBI-ProteinID:
XP_036448689
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MPCEVKPIRYGHSEGHTDVCFHEDGSCIVTCGSDGDVRIWESLDDDDPKSINVGEKAYSV
ALRNGKLVTAVSNNTVQIHTFPDGDPDGILTRFTTNANHVTFNASGTRVAAGSSDFMVKV
IEVTDSSKQKTLRGHDAPVLSVAFDPTDEFLASSSCDGSVAVWSVEDQTQVVNWNVLAKC
NDVSNTKSLCRLAWQPLSGKLLAVPVDTSVHLYERSSWTHVGTLSDDLTTQQVINVVVWS
PCGKFLAAGTVGGTLSVWDVEAKLCIERQKHERGYTVCGMAWHPSGGQIAFTDTEGCLGL
LDGLCASSSSSSSSTTNKNTKAAVSKEPKDYDDLFDEEDADGLLDQCVSDSGSPAKNAVE
DDDDDDDDDLMPATGKPRNRGSFLDDDDNSQDTGSVKVDKLADNDGDSAILPPVVPAVPR
PVYEGPMPTPPQKAFQPGSTPTHLMHRFMMWNSVGIVRCYNDEQDNAIDVEFHDTAVHHA
MHLTNSLDHCMADLSQEAVLLACEGTDELASKLQCLHFSSWDTNKEWMVDLPKGEDVQAL
CLGHGWAAVGTSAMLLRVFSIGGVQREIFSLPGPVVCLAGHGEQLLIVYHRGTGFDGDQA
LGVQLLQLGRKKRQIIHGEPLPLSRKSYLAWMGFSAEGTPCSVDSEGVVRMLNRSMGNTW
TPVCNTRESCKSKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVSILPFKLPLCQT
STEKGQMEEQYWRSVLFHNHFSFLSSSGYEVNEENQRQQEKEQQEALMKMFALSCKLERE
FRCVELAEMMTQSVVTLAIRYASRSRRMLLAQRLNELALEKANQLEEEEELDEEPAYHST
AQSTGFNQSSRASRHSSSRAAQENDDEYEEEEDEQEESMEAEDEAESRKPRVNPFSKGPK
GSPEKPSPKPVSKEGRVNPFKVAGAGKSSGSPAGQPRVANVLDTMTMSSRKPSALTGSSK
QSKAPVLKPLAPKPRSKAQATLLQMSANKGAGKKPEEKQTEKETEKQTVERTPSAAGDNA
ENTRPKTGFQMWLEENRKNILADNPDLEETEIIKEAMGRFRTLSAEDRLKWTERAKGGSG
EVADLKKRKREEEEENKEMDGEMEVDENSAKKKKPLNTSAKLSAFAFNKD
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtgaggtgaaacccatccgctatggccactcagagggccacacagacgtctgt
ttccatgaggatggcagctgcatcgttacctgtggaagtgacggcgatgtccgcatatgg
gagagtttagatgacgatgatcctaaatccataaatgttggagagaaggcctactccgtg
gctctgagaaatgggaaactggttacagctgtttccaataacacagttcagattcacacg
tttcctgatggagatcctgatggaattcttactcgcttcactaccaatgctaaccacgtc
accttcaacgccagtggcacaagagtggctgctggatctagcgacttcatggtgaaggtg
atcgaggtgacggacagcagtaagcagaagactctccgtggacacgacgctcctgtcctg
agcgtggcctttgaccccactgatgagtttcttgcgtcctccagctgcgatggctctgta
gcagtgtggtctgtagaagatcagactcaggtggtgaactggaatgtgctggcaaagtgc
aatgatgtcagcaataccaagtctctgtgcagacttgcctggcagccgctgtctgggaag
ctgcttgcagttccagtggacacgagtgtacatctgtatgagaggagctcttggactcat
gttggcactctttctgatgaccttactacccagcaggtcattaacgtggtggtttggtca
ccgtgtgggaagtttctggcagctgggacggtgggaggaactctctctgtatgggacgtt
gaagccaagctatgcattgagagacagaagcatgagagaggttacactgtgtgtgggatg
gcctggcacccctctggaggacagatcgctttcacagacactgagggctgtctgggtctg
ttagatggactgtgtgcatcttcctcatcttcatcatcctccaccaccaacaagaacacc
aaggctgctgtgagcaaagagccgaaggactacgatgatctgttcgatgaggaagatgct
gacggactgttggatcagtgtgtgagtgactctggctctccagcgaagaatgcggtggag
gacgacgacgacgacgacgatgatgacctcatgccggccactggaaaaccacggaacaga
gggagcttcctggacgatgacgacaattctcaagataccgggtcagtgaaggtggataag
ttggccgacaatgacggcgacagtgccattcttcctcctgttgtgccagctgtgccgcgg
ccggtctatgaggggccgatgcccaccccacctcagaaagccttccagcctggctccacc
ccaacacacctcatgcatcgctttatgatgtggaactctgttggaatagtgcgctgttat
aacgatgaacaggacaacgctatcgatgtggagtttcatgacacagctgtccatcacgcc
atgcacctcacaaactccctggaccactgcatggctgacctgtcccaggaggccgttcta
ctggcctgcgaaggaaccgatgagcttgcgagtaagctccagtgtctgcacttctcctca
tgggacacaaacaaagagtggatggtggacctgcccaaaggcgaggacgtgcaggccttg
tgtttggggcacggctgggcagcggtgggcaccagcgccatgctgctgcgcgtcttctcc
atcggcggagttcagagagaaatcttcagcctaccgggacctgtggtgtgcctggcagga
cacggagagcagctcctcatagtttaccacagaggtactggttttgatggagatcaggcc
ctgggggttcagctgctgcagctcggccggaaaaagcggcagatcatccacggtgagccg
ctgccgctgtcccgcaaatcctacctggcttggatgggcttcagtgcagaggggactccg
tgttcggtggactcggagggtgtggtgcggatgctgaatcgctcaatgggaaacacgtgg
actcctgtgtgcaacaccagagagagctgtaagagcaaatctgaccactactgggtggtc
ggcatccatgagaacccacaacaactcaggtgtatcccctgtaaaggttctcgattcccc
ccaactcttccccgccctgctgtgtccatcctgcccttcaaactacccctctgtcagacc
agcacggagaaaggccagatggaggagcagtactggcgctctgtgctcttccacaatcat
ttcagcttcctatcctccagcggttatgaggtcaatgaggagaaccagaggcagcaggag
aaagagcagcaggaagcgctgatgaagatgttcgctctgtcgtgtaagctggagcgcgag
ttccgctgtgtggagttggcggagatgatgacccagagtgtggtcactttggccatccgc
tacgcctcacgctccaggcgaatgcttctggctcagaggctcaacgaactcgctttggaa
aaggccaatcagctggaagaggaggaggagctagacgaggagccggcctatcacagcaca
gcacaaagcacagggtttaaccagtccagcagagcatccagacactccagcagcagagca
gcacaggagaacgatgatgaatatgaagaagaagaagacgaacaggaagaatcaatggaa
gcggaggatgaagcagaaagcaggaaaccacgtgtgaaccctttcagtaaaggcccaaaa
ggatcacctgaaaaaccttccccaaaaccagtcagtaaagaaggccgtgtgaaccctttt
aaggtcgctggtgcaggaaagtcatccggatctcctgcaggccagcccagagtggctaat
gttctggacaccatgaccatgtctagcaggaaaccttctgctctgactggttcttcaaag
cagagcaaagctccagtgctgaagcctctggcacccaaacccaggagcaaggctcaggcc
actctgctgcagatgagtgcgaataaaggagctggaaagaagccggaggagaaacaaaca
gagaaagagacagagaaacagactgtagagagaactccatcagcagcaggagataatgcg
gagaacacgagaccgaagacgggtttccagatgtggctggaggagaaccggaaaaacatc
ctcgccgacaatcctgacttagaagagacggagatcattaaagaggccatgggccgcttc
cgcacgctgtcagccgaggacagactgaagtggacagagagagcgaaaggtgggtcggga
gaggtagcggacctgaagaagagaaagcgggaggaggaggaggagaataaagagatggat
ggagagatggaggtggatgagaacagcgctaagaagaaaaagccactgaacacttccgct
aagctctccgccttcgccttcaacaaggactaa
DBGET
integrated database retrieval system
