KEGG   Colossoma macropomum (tambaqui): 118823409
Entry
118823409         CDS       T09004                                 
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
  KO
K14290  exportin-1
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03008  Ribosome biogenesis in eukaryotes
cmao03013  Nucleocytoplasmic transport
cmao03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118823409 (xpo1b)
   03008 Ribosome biogenesis in eukaryotes
    118823409 (xpo1b)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    118823409 (xpo1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmao03019]
    118823409 (xpo1b)
   03009 Ribosome biogenesis [BR:cmao03009]
    118823409 (xpo1b)
   03016 Transfer RNA biogenesis [BR:cmao03016]
    118823409 (xpo1b)
   03036 Chromosome and associated proteins [BR:cmao03036]
    118823409 (xpo1b)
Messenger RNA biogenesis [BR:cmao03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     118823409 (xpo1b)
Ribosome biogenesis [BR:cmao03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    118823409 (xpo1b)
  Pre-60S particles
    118823409 (xpo1b)
Transfer RNA biogenesis [BR:cmao03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    118823409 (xpo1b)
Chromosome and associated proteins [BR:cmao03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     118823409 (xpo1b)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd mTOR_dom Hydrolase_3 BspA_v
Other DBs
NCBI-GeneID: 118823409
NCBI-ProteinID: XP_036448879
LinkDB
Position
Unknown
AA seq 1071 aa
MPAVMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISM
TLNPANPVSNQAFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTTDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcagttatgacaatgttagccgaccatgcagccagacagctgctggacttcaac
cagaaactggacattaacctcctggataatgtggttaactgcttgtaccatggagtggga
ccgcagcaaagaatggcccaagaggtcctcacccatttgaaggagcacccagatgcatgg
actcgagtggacaccattctggagttctcccagaacatgaacaccaaatactatgctctg
cagattctggaaacagttattaaaacaagatggaagattcttcctagaaaccagtgtgaa
ggtattaaaaagtatgtcgtcgggctgatcatcaagacgtcgtctgatgcagccaacgta
gagaaagaaaaggtgtacattggaaaactcaacatgatcttagttcagatcctgaagcag
gaatggccgaagcactggcccacattcatcagcgacattgttggagcaagtcgcaccagt
gagagcctctgccagaacaacatgataatcttaaagctgctcagtgaggaggtgtttgat
ttctccagtggacagatgacccaggtcaaagccaagcacctgaaggacagcatgtgtaat
gagttctctcagatctttcagctctgccaatttgtgatggaaaactcccagaatgctcct
ctggtgcatgccactttggaaacgttgctgcggtttttgaactggatccctctgggctac
atcttcgagaccaaactcatcagcactctggtgtacaagttcctcaatgttcccatgttc
cggaacgtgacgctgaagtgtttgacggagatcgcaggtgtgagtgtgagccagtacgag
gagcagttcgtcacactgttcacactcaccatgatgcagctcaaacagatgctgcctctg
aacacaaatatccgtctagcatacgcaaacgggaaggatgatgagcagaacttcatccag
aacctcagcttgttcctttgcacctttctcaaagagcacggccagctcatcgagaagaga
ctcaacctgcgtgagaccctaatggaggctctccactatatgcttctggtgtcagaggtg
gaggagacagaaatctttaagatttgtctggagtactggaatcacctggcagcggagttg
taccgagagagtcccttcagcacctccacctcacccctgctctctgggagccaacacttt
gatgtgcccccgcgcaggcagctctacctacctgtgttgtccaaggtgcgtctgctcatg
gtgagtcgcatggctaaaccagaggaggtactggtggttgagaatgatcagggggaggtg
gtgcgggagttcatgaaggacacagactctatcaacctctacaaaaacatgagagaaacg
cttgtgtacctaacccatctggactatgcggacacagagcggatcatgacagaaaagctc
cataaccaggtaaatgggactgagtggtcttggaagaacctgaacacactgtgctgggcc
attggctccattagtggagccatgcacgaggaggatgagaagaggttccttgttacagtc
atcaaggacctgctaggtttgtgtgagcagaagcgtggtaaggataacaaggccatcatt
gcttccaacatcatgtacattgtgggccagtacccgcgattccttcgtgcacactggaag
tttcttaagactgtggtcaacaaactgtttgaattcatgcatgagacccatgatggagtg
caggacatggcgtgtgacacattcattaagattgctcagaagtgcaggagacattttgtg
caggtgcaggttggagaagtcatgcctttcatcgacgagatcctcaacaatatcaacacc
atcatctgtgacctgcaaccacaacaggtgcatacattctatgaggcagtgggttatatg
attggcgctcagacagaccaggctgtgcaagagcacctgattgaaaaatacatgctgcta
cccaaccaggtgtgggacagcataatacagcaggccaccaagaacgtggacatcttgaag
gacccagagacagtgaagcagctcggcagtatcctgaagaccaacgtgagggcgtgtaag
gctgtgggtcaccccttcgtcatacagctgggacgaatttatctagacatgcttaatgtc
tacaagtgcctcagcgagaacatctcagcagctatacagaccaatggagagatggtgaca
aagcagcctctgatcagaagcatgcgcactgtgaagagagaaactctcaaactcatttca
ggctgggtcagccgttccaacgacccacagatggtgggggagaactttgttccgccactg
ctggacgccgtcctcatagattaccagcggaatgtcccggcggccagagagccggaagtt
ctcagcaccatggcgaccatcgtaaacaaattgggtggtcatatcacaggggagatccca
cagatatttgacgctgtgttcgagtgcacgctgaacatgatcaacaaagattttgaggag
tatcctgagcaccgaacacacttcttctacctgcttcaggctgtgaattcccactgcttc
cctgccttcctggccatccccccagcccagtttaaactggtgctggactctatcatctgg
gcctttaaacacaccatgagaaacgtggctgacactggtttgcagattctctacacattg
ctgcagaacgtggcccaggaagaggctgcagctcagagcttctaccagacttatttctgt
gacatactgcaacacatcttctctgtagtcacggacacatcacacacagctggtctgaca
atgcatgcctctatcctggcatacatgtttaatttggtggaggagggtaagataagtatg
accctgaaccctgcaaaccctgtcagcaatcaggctttcatccaggagtatgtggccaac
ctactcaaaaccgccttccctcatctacaggatgcgcaggtgaaggtgtttgtgacgggg
ctgttcagtttaaaccaggacatccctgcttttaaagagcacctgagagacttcctggtg
cagatcaaggagtttgcgggtgaggacactacagatttgtttctggaggagcgagaggca
tctctacgccaggctcaggaagagaagcacaaactgcagatgtctgtccctggaatcctg
aaccctcatgagatcccagaggagatgtgtgactga

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