Colossoma macropomum (tambaqui): 118823498
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Entry
118823498 CDS
T09004
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03013
Nucleocytoplasmic transport
cmao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118823498 (pnn)
03015 mRNA surveillance pathway
118823498 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118823498 (pnn)
03041 Spliceosome [BR:
cmao03041
]
118823498 (pnn)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118823498 (pnn)
Spliceosome [BR:
cmao03041
]
Complex C
Other components
EJC/TREX
118823498 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
118823498
NCBI-ProteinID:
XP_036449068
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MAVAVRTLQDQLEKAKESLKSVDENIRKLTGRDPNELRPGQTRRLSLTGPGGGRGRGINL
LRRGLSDGGGGPPAKQRDIEGALLRLAGDQRARRDSRHDSDAEDDDDVKKPALQSSVVAT
SKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESTVSTERLKRRQEIEQKLEV
QAEQERKKVESERRELFEERRAKQTELRLLEHKVELAQLQEEWNAHNAKIIKFIRTKTKP
PIFYLPGRMCSATQKLLEESQKKMNTLFEERREAFAEHLNKMEARPRRQPQRAAERGTED
GGRAEEPKKEDGEEEGKQRVRLTGNRHDVEMEEEEDEEEAGEEEGEEREEREEVREMEIE
GEQQQQQKEEEEEEVKEKEEEEGKAEGDEEEQEEMAVVEEKEPKEVEEKMEVTAEVKESE
GQAVQSQQQEKSPEVAVAEVGTDNREEEEDAGKGARQESVAESQETSENVMEVQAGSEEP
PVGASEPSAPSAMEPCTTEADGALELQKRPEEDAPSQEEIPEPPAQPQEPKAGPKEAEEA
EEEGEDSRGRSKARPKQSRSRSSSSSSSSSSSSSSSSGSSSSSSGSSSRSSSSASSSSSS
SSRSRSRDRDGGHARRRRNSDRERKKSGSERGHKSSKSSGGREGKGSKDKSSKSDRKRRS
SEGSRSGKRSSRSDRDRKSDRKEKRR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcggactctgcaggaccagctggagaaggcgaaggagagcctgaag
agcgtggacgaaaatatacggaaactgaccggcagagacccgaatgagttacgacccggt
cagaccaggcgtttgtccctcacaggcccaggtggaggtagagggcgaggcatcaatctg
ctgaggcgtggactctccgatggcggtggaggacccccagccaaacagagggatatcgaa
ggggcactcttgaggctggcgggggatcagcgagccaggagagattcacggcatgacagc
gacgctgaggatgatgacgatgtcaaaaaaccagcgttgcagtcatcagtagtagctacc
tccaaagagcgaacgcgccgagatcttattcaagatcagacgatggatgagaagggcaaa
caaagaaatcggcgcatgtttggcctgttgatgggaacgctgcagaagtttaagcaggag
tctactgtgtccacagagaggctgaaaagacggcaagaaattgagcagaaactggaagtc
caggcagaacaagagcgcaagaaggtggagagtgagagacgcgagctgttcgaggagaga
cgtgccaagcagacagagctgaggcttctggagcataaagtggagctggcacagctgcaa
gaagagtggaacgcacacaatgccaagattataaagttcattcgaaccaagaccaagcca
cccatcttctatctgcctggtcgcatgtgctcagccacccagaagctcctggaggagtct
cagaaaaaaatgaacactctatttgaggagagacgtgaagcttttgccgagcatttgaac
aagatggaggctcggccgaggcgtcagccccagcgggctgcagagagggggacggaggac
ggcgggcgggctgaagagccgaagaaggaagatggagaggaggagggtaagcagagagta
aggctgacaggtaaccgacacgatgtagagatggaggaggaggaggatgaggaagaggca
ggagaggaggaaggagaggagagggaggagcgagaggaggttagggagatggagattgag
ggggagcagcagcagcagcagaaggaggaggaagaagaggaagtgaaggagaaagaggag
gaggagggcaaggcagaaggagatgaggaggaacaggaagaaatggcagtagtggaggag
aaagagcctaaagaggtagaggagaagatggaggttacagcagaggtgaaggagtctgag
ggccaggcagtgcagagccagcagcaggagaaaagtccagaagtagctgtagctgaggta
ggtactgacaatagggaggaagaggaagatgcaggaaagggagctcgtcaggaaagtgtt
gccgagtcccaggaaacctccgaaaacgtcatggaagtccaggcagggtctgaagaacct
ccagtgggagcctctgaaccgtctgcaccttctgcaatggagccatgcaccacagaggca
gatggtgctctggagctccaaaagaggccagaagaagacgctccttctcaagaggagatc
cccgagccacctgcccagcctcaggaacccaaggcaggccctaaggaggccgaggaagct
gaggaagaaggcgaagattcccgcggccgcagcaaagccaggcccaaacagagtcgaagc
cggagcagctccagttcctctagcagctcctcgtcctcctccagctccagcgggtccagc
tcgtcctccagcggctccagcagccgcagcagctcctcggcctcgtcttcctcgtcctcc
agctcgcgcagccgcagccgcgacagggacggggggcacgcgaggcgccgcaggaattca
gaccgcgagcgcaagaagagcggcagcgagagggggcacaagtcgtccaaaagcagcggc
gggcgagagggcaaagggtccaaggacaagagctccaaatcggacaggaaaaggaggagc
tcggagggaagcaggtcaggaaagaggtcgtctcgcagtgaccgggaccgcaagtctgat
agaaaggaaaagaggcgctag
DBGET
integrated database retrieval system
