Colossoma macropomum (tambaqui): 118823761
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Entry
118823761 CDS
T09004
Symbol
irf2bpl
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118823761 (irf2bpl)
04121 Ubiquitin system [BR:
cmao04121
]
118823761 (irf2bpl)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
118823761 (irf2bpl)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Atypical E3
118823761 (irf2bpl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
zf-C3HC4_2
DUF7623
Motif
Other DBs
NCBI-GeneID:
118823761
NCBI-ProteinID:
XP_036449449
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSSAQVASSRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIETARHLKRA
HGFQDGRSPGPGGAGVPLPVPPPPPSSSSLPPPPVKTHVKETVQLNHVDGSSKQQQQQAQ
QQAGLERYSSRFDYTGMSAHAARLPNGLNGFPKADDGPPELNRQSPNSRRGGHGLVSLPA
QMSVPPNLLPQTMLNGPASGAACAGLTPHGLAARAPPSSSSQSSSSSSSGLGLAEPGKRP
ASVSSTDQEREARERQRNAEALAELGESLRNRAEEWAGKPKLVRDTLLTLSGSAPFDVRF
KKDHALAGRVFAFDAVAKPGSDYELKIFVEYPSGSGTVFSSASGVAKQMYHDCMKDYGRG
LSSGFKYLEYEKKHGSGDWRLLGDLLPEPVRFFKEMLGPDMLPQPHVDAGCPLLPSSALA
GVLPRTLPASSAAAASALRAGARKRKASPEPDSLDERQQQQQQQQWMASQSAAAVGSFGA
CHGGPPPLGPVHASRATPPEPAQNGQSPMAALMSVADALGGAGGAHSPKDANSVHSTTSA
RHSSTGSGGGSSPVSPASVSGQRRLASRNGDAQQQAHADHAGAHGTHGVPDSPMAGSGPL
CCTICHERLEDTHFVQCPSVPGHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPW
AFMQGEIATILAGDVKVKKERDP
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgcgcaggtcgcctcgtcgcggcggcagtcgtgctacctgtgcgacctgccc
cgcatgccgtgggccatgatctgggacttcacggagcccgtttgccgcggctgcgtgaac
tacgagggcgcggaccgcatcgagtttgtgatcgagacagcgcggcaccttaagcgcgcg
cacggcttccaggacggccgctctccgggcccaggaggcgcgggggtgccgctgcccgtg
ccgccgcctccgccgtcttcgtcgtcgctacctccgccgcccgtgaagacgcacgtgaag
gagacggtgcagctgaaccacgtggacggctcgagtaagcaacaacagcagcaggctcaa
cagcaagcggggctcgagcgctactcctctcgcttcgactacacgggtatgagcgcgcac
gcggcgcgcctccccaacggtctgaacggcttcccgaaggcggacgacgggcctccggag
ctgaaccgccagagccccaactcgcggcgcggcggacacgggctggtttcgcttcccgcg
cagatgagcgtgcctcccaacctgctgccccagaccatgctgaacggacccgcttcaggg
gctgcttgcgctggcctcacaccgcacggcctggccgcgcgcgcgcctccatcttcatca
tcacagtcgtcatcatcgtcgtcgtccggcctgggcctcgcggaaccgggaaaacgaccc
gcgtccgtctcgagtacggaccaggagcgcgaggcgcgcgagcgacagcgcaacgccgag
gcgctggcagagctcggggagagcctgcgcaaccgcgccgaggagtgggcgggcaagccg
aagctcgtgcgcgacactctgctcacgctgtccggctccgcgcccttcgacgtgcgtttc
aagaaggaccatgcgctcgcgggccgcgtgttcgccttcgacgccgtggccaagccgggc
tccgactacgagctgaagatcttcgtggagtacccgagcggctcgggcaccgtcttctcg
agcgcgtcgggcgtcgccaaacagatgtaccacgactgcatgaaggactacggccgcggc
ctctcgtcaggcttcaagtacctcgagtacgagaagaagcacggcagcggcgactggcgc
ctgctcggcgacttgctgcccgagcccgtgcgcttcttcaaggagatgctggggcctgac
atgctgccgcagccgcacgtggacgcgggctgcccgctgctcccttcctcagcactcgcc
ggcgtgctgccgcgcactctgccggcgtcctccgcggccgccgcgagcgcgctacgagcg
ggtgcgcgcaaacgcaaagcctcaccagaaccggactcactcgacgagcgccagcagcag
cagcagcagcagcagtggatggccagccagagcgcggcagcggtaggctcgttcggggcc
tgccacggaggaccgccgccgttgggccccgtgcacgcgagccgtgccacgcctccagaa
cccgcacagaatggacagtcgcccatggctgcactcatgtcggtggcggacgcgctagga
ggagcaggcggcgcgcactcgcccaaggacgcaaactcggtgcactccaccacgtccgcg
cgccacagcagcaccggcagcggcggcggcagcagcccggtgtctccggcctcagtctca
ggccagcggcgcttggcctcgcgcaacggcgacgcgcagcagcaagcgcacgcggaccac
gccggtgcgcacgggacccacggcgtgccggactcgcccatggctggcagcgggccgctg
tgctgcaccatttgccacgagcgcctggaggacacacacttcgtgcagtgcccctcggtg
cccggccacaagttctgcttcccgtgctcgcgcgagagcatcaaggcgcaaggcgccaca
ggcgaggtgtactgccccagtggagagaaatgcccccttgttgggtccaacgtgccttgg
gctttcatgcaaggggagatagcgaccattcttgccggggacgtgaaggtgaagaaggag
agggacccttga
DBGET
integrated database retrieval system
