Colossoma macropomum (tambaqui): 118824025
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Entry
118824025 CDS
T09004
Symbol
sox11a
Name
(RefSeq) transcription factor SOX-11a
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118824025 (sox11a)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118824025 (sox11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118824025
NCBI-ProteinID:
XP_036449815
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MVQQAQREECEGAGRGDAGADSDESEFAARSPAPGAEANPDWCKTATGHIKRPMNAFMVW
SKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYR
PKKKPKLDGANAGASKPEKAASSPEKACAKASKSAASKRCPKAKASSKSGAKAAAHHHLH
QQQFQHHHGDEYALKSTRGAAGKSARSSMDFSDDDEDEHDEHSLEDECEERARVPASPTL
SSPGECEGASMYEDVRSSRLYYSFKNITKQQSGVHAYSLAHSASASPASASSRSASTSSS
GSSDTDDLLFDFSLNFAAAAAAAHGAESGGQNAGGLALSLVDKDLDSFSEGSLGSHFEFP
DYCTPELSEMIAGDWLEKNFSDLVFTY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaggcgcagcgcgaggagtgcgagggcgcgggcaggggggacgccggcgcc
gactcggatgagagcgagttcgccgcgcgcagccccgcgcccggcgccgaggccaaccca
gactggtgcaagacggccacgggccacatcaagcgacccatgaacgccttcatggtttgg
tccaagatcgagaggcgcaagatcatggagcagtcgccggacatgcacaacgccgagatc
tccaagcgcctgggcaagcgctggaagatgctcaaggacagcgagaagatcccgttcatc
cgcgaggccgagcgcctgcgcctcaagcacatggccgattaccctgactacaagtacagg
ccgaagaagaagcccaagctggacggcgccaacgccggtgcctccaagccggagaaggcg
gcgtcgtcgccggagaaggcgtgcgccaaggcgtccaagagcgccgcgagcaagcgctgc
cccaaagccaaggcgagcagcaagtccggagccaaagcggcggcgcaccatcacctccac
cagcagcagttccagcaccatcacggcgacgagtacgcgctaaagagcacgagaggggcg
gcgggcaagagcgcgaggagcagcatggacttctcggacgacgacgaggacgagcacgac
gagcacagcctcgaggacgagtgcgaggagcgcgcgcgggtgcccgccagccccacgctc
agctcgccgggcgagtgcgagggcgcgagcatgtacgaggacgtgcgcagctcgcggctc
tactacagtttcaagaacatcaccaagcagcagagcggcgtgcacgcctactcgctcgcg
cactcggcgtcagcgtcgccggcttcagcctcgtcccgctcagcctccacgtcatcttca
ggctcgtcggacaccgacgacctgctgttcgactttagcctgaacttcgcggcggcggcg
gcggcggcgcacggcgccgagagcggcggccagaacgcgggcggcctcgcgctgtcgctc
gtggataaagacttggactcgttcagcgagggcagcctgggctctcacttcgaattcccc
gactactgcacgcccgagctgagcgagatgatagccggggactggctcgagaagaacttt
tcagacctggtcttcacgtactga
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