Colossoma macropomum (tambaqui): 118824072
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Entry
118824072 CDS
T09004
Symbol
samd4a
Name
(RefSeq) LOW QUALITY PROTEIN: protein Smaug homolog 1
KO
K27396
protein Smaug
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118824072 (samd4a)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118824072 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
118824072
NCBI-ProteinID:
XP_036449883
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MMFRDQVGVLASWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLAECTELHVLEV
EANNPVVISQWQAEPKERLISLVLTHLPLLKPGNAEAKGEYMRLLPKILTHTIEFGRHLE
ESRQLLSYALIHPATSLEDRAELALWLNHLEERAATRGAGDSLERVSSSSHHGGQSQHLY
PQHQRYGSDDRLNGWQGSRDSGLGWQTQQGCENGHLLLYPSSSVPSTINTVGTGSGTNSI
LPGGQHSPLKRSVSLTPTMSGPSNPPLGHGWLSQEDLRGRAAPDHAPLSPQSSIASSGSG
GSEHMEDGSGLGAALRSTFHEEGSGMRDVPAWLKSLRLHKYAGLFSTMTYEEMMSLTEQQ
LEAQNVTKGARHKIIISIQKLKERQNMLRSLEKDVLEGGNLRAPLQELHQIILTPIKAFS
VEDSSQRPLLSAEGKSSLAGSHLGGGESEASTSLIAEGDIPAQFTRVMGKVCTQLLVSRP
DEENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLVDMAGYRQQRSG
RGFGQSNSLPSAGCVGSGVSGRRNLRQFPVPSRSLPVQRLGLLGTAGLLGHTHTPRSSSS
TPTSLKQGRQGLWFANPGGSNSMPSRTHSSVQRTRSLPVHTNPHTMAMFQQSDLQVPVTE
PDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgtgaccaggtgggcgtcctggccagttggtttaaaggctggaacgagtgc
gagcagacggtggccctgctctctctgctgaagcgggtcagccggacccaggcgcgtttc
ctgcagctctgtctggagcattctttggctgagtgcactgagctgcacgttctggaagtg
gaagccaataacccagtggtgatcagtcagtggcaggctgagccgaaggagcgtctgatc
tctctggttctgacccacctgcccctcctcaagccgggcaatgcggaggcgaagggcgag
tacatgcggctgctgcccaaaatcctgacccacaccatcgagtttggccggcacctggag
gagagcaggcagctgctgtcgtacgccctcatccacccggccacgtcgctggaggaccgg
gccgagctggcgctgtggctgaaccacctggaggagcgcgcggctacgcggggggccgga
gactcgctggagcgcgtgtcatcctcgtcccaccacggcggccagagccagcacctctat
cctcagcaccagcgctacggctccgacgaccgcctcaacggctggcagggctcgcgcgac
tccggcctgggctggcagacgcagcagggctgcgagaacggacacctgctgctctacccg
tcgtcctctgtgccctccaccattaacacagtgggcacgggcagcgggaccaactccatc
ttgcctgggggtcagcacagtcccctgaagcgctcagtgtctctgactcccaccatgagc
ggcccctctaaccccccactgggtcacggctggctgtcccaggaggacctgcggggccgg
gcagcaccagatcatgctcccctctcgccccagagcagcatcgcttcatcgggcagcggc
ggcagcgagcacatggaggacggatccgggctgggggccgcacttcgcagcacattccac
gaggagggaagcggaatgagggatgtgccggcgtggctgaagagtcttcgcctccacaag
tacgccggcctcttctccaccatgacctacgaggagatgatgtcactgacggagcagcag
ctggaggctcagaacgttactaaaggagcacgacacaagatcatcatcagcatccagaaa
ctgaaagagaggcagaacatgctacgctctctggagaaggatgtgctggaggggggtaat
ctccgcgctccgctgcaggagctccatcagatcatcctgacgcctattaaagccttcagt
gtggaggattcctcacagcgccccctgctgagtgccgaggggaaaagcagcctggccggg
tctcatctgggcggaggagagtctgaggccagcacttcgctcatcgctgagggagacatc
cccgcccagttcacacgcgttatgggcaaagtttgcacacagctcctcgtctcacggccg
gatgaagagaacatcagctcatacctgcagctcattgataagtgcctaatccatgaggct
ttcacagagacgcagaagaagagattgttgtcatggaaacagcaggtgcagaagctcttt
cgctcgttccctcgtaaaaccctcgtggacatggcaggataccgtcagcagaggagtggc
cgtgggttcggtcagtctaactccctccccagtgcgggttgtgtgggcagtggtgtgtcc
ggcaggagaaacctgaggcagttccccgtcccttcccgcagtctccctgtgcagcgtctc
ggcctgctgggcaccgccggcctgctggggcacacgcacaccccccgcagctccagcagc
acgccgaccagcctcaaacagggcagacagggtctgtggtttgccaaccccgggggcagt
aacagcatgcccagtcgcacccacagctcagtccagcggactcgctctctccccgtccac
accaacccacacaccatggccatgttccagcagtcagatttgcaggtgccagtgaccgag
ccggacattaataaccgtttggagtctctctgtctcagtatgactgaacacgctctagga
gatggtgttgatcggacgtccactatctga
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