Colossoma macropomum (tambaqui): 118824101
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Entry
118824101 CDS
T09004
Symbol
si:ch211-266g18.9
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118824101 (si:ch211-266g18.9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118824101 (si:ch211-266g18.9)
Membrane trafficking [BR:
cmao04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118824101 (si:ch211-266g18.9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
TPR_Vps41
Clathrin
PhnI
Motif
Other DBs
NCBI-GeneID:
118824101
NCBI-ProteinID:
XP_036449936
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MEENLSIFSSARLFEKAPTGKGKDRSTIECVEWFCSNLYVGLKDGTVQHLSVLSSSGGER
PERVREVGRRQMGRGGVVSQLKAVPVLNHLLVLWDGSVTTLNMFSLEPVPGLKKIQNVSV
FYVSQPAAHSQPVFVSLFTASTKRRVLSIHKVYVDRWESVGHVALPQDPVALAVYETCLC
VATTDRYILHDYFTQSTLDLFPHDHAKQNIIVSESGKGEFLLNGPGNLGMFVMKDGVSER
PPVQLPDGVLDAVVDFPYVLALQSQTLYIYSMLDQRLKQTISMQSAKALLSTTESVLVVA
EREIHWLSQTPLQDQIQGLLRCERADEALTLLDGVQALLPEDSYKNLHRSIICISGWLKF
YREAFLDAKELFIKGGLDPRDIISVYPAMTVISSDFKSQRPAVSNAKDLWRLSRDDWPTF
QQYLSFLSHFLRETRGTVRGQICPQDVDTALLKLYLEQGDDENLEQLVSSPNDCVLHVCL
PELEHHKRFFTMGLLYQSQGQHFNAIQTWVRIVDGVCVDLRPGVFPHIVNTLCQLKQKSI
IMKFIDWVLQRDQKVGVLIFTKRDPDDQSTFAPEEVLSFLSNYPAASTLYLEYLVHELHS
KEEKHHTLLATMYITHILQTAQRTQDSDVNTEMREKLQQLLWYSSIYNTDAVQAKIKSSA
LHVEKAILLGRAGQHRTALQILVNQEKDHEAAENYCRRTSAGQGREFTQQLFLCLLQVYL
ESNQSVTAVVDLLNNNAMTFNLVRVLQVLPSSWSLQLVRRFLCESLRGTVHERRMRGLEK
NLAKVEHLRHKHAWMEATQEKVKLDRSRVCHSCRRQLMGPEFLRRPTGELIHTHCYTADK
SL
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaatctgagcatctttagttctgcacggctctttgagaaggcgcccactggc
aaaggcaaagacagatccaccattgagtgcgtggagtggttctgcagcaacctttatgtc
ggattaaaggacggaacggttcagcatctgagtgtgttgagctcgagtggtggagaaagg
cctgaaagagtgcgcgaggtggggaggaggcagatgggccggggtggggtcgtcagccag
ctgaaggcagtcccagttctgaaccaccttctcgtgctctgggacggctctgtcaccacg
ctaaacatgttctccctggagcccgtcccaggcctgaagaagatccagaacgtctctgtg
ttttacgtcagccagcctgctgctcactctcagcctgttttcgtcagtctcttcacagcc
tccaccaaacgcagagtgctgagcattcacaaggtgtatgtggacagatgggagagtgtg
ggccatgtggctctgcctcaggaccccgtggctctggccgtgtatgagacctgtctttgt
gtggccacgactgacagatacattctccacgattacttcactcagagcactctcgatctg
ttcccacacgaccacgcaaaacaaaacatcatcgtcagtgaaagcgggaaaggagagttc
ctcctaaacgggcctggaaatctgggcatgtttgtgatgaaggacggtgtgtctgaacgg
cctcctgtgcagttgcctgatggggttctggacgcggtggtagatttcccctatgtgctg
gctctgcagagtcagaccctttatatctacagcatgctggaccagcggctcaaacagacg
atttccatgcaaagcgccaaagctcttctctccaccacagaaagtgtgcttgtagtggct
gagagggaaattcactggctgtcacagacgcccctgcaggatcagattcaaggcctgctc
agatgtgagcgagcagatgaggcattgacactgctggacggagttcaagcacttttgcct
gaggactcttacaagaacctgcacaggagtattatctgcatatctgggtggttaaagttt
tacagagaagcttttctcgacgccaaagagcttttcattaaaggtggcctggacccgagg
gacatcatcagtgtttacccagcaatgactgtcatcagttcagactttaaatcccagcgt
cctgctgtaagcaatgccaaagacctgtggaggttaagtagggatgactggccaacattt
caacagtacctgagcttcctcagccatttcttaagagagacccgcgggacagtccggggt
caaatctgccctcaggatgtcgacacagcactacttaaactgtatttagagcagggcgat
gacgaaaacctggagcagcttgtgtcgtctcctaatgactgcgtactccatgtgtgcttg
ccagagttggagcatcacaaaagatttttcaccatgggattgctctaccagagccagggt
caacatttcaatgcaattcagacgtgggtgcggattgtggatggggtgtgtgtggacttg
cggcctggtgtgtttccacacatcgtgaacactctctgtcagctcaagcagaaatccatc
atcatgaaattcatagactgggttcttcaaagggaccagaaggttggggtgttgattttt
accaaaagagacccagacgaccaaagcacatttgcaccagaagaagttctatcattctta
tcaaactacccagcggcttcaactctgtatttggaatatttggtccatgagctgcacagc
aaggaagagaagcaccacactctgctggccaccatgtacatcactcacatcctccagact
gcacagaggacacaggacagtgatgtaaacacagagatgagagaaaaactgcagcagtta
ctgtggtactcctccatctacaacactgatgctgtacaagcaaaaataaagtcatcagcc
ctccatgtggagaaagctatcctgctggggcgagctggccagcacaggacagccctgcag
attctagtcaaccaagaaaaagaccatgaggctgcggaaaactactgcaggaggacctct
gctggacaaggccgggaattcacccagcagctcttcctctgccttctccaggtctatctg
gagtccaatcagagcgtgactgcggtggtggatctcctcaacaacaacgccatgactttt
aatctggtcagggtgctgcaagtcctgcccagctcctggtccctccagctggtgaggcgt
ttcctgtgtgagtcgctgagagggacggtgcatgagaggaggatgagaggcctggagaag
aacctggccaaagtggagcacctcaggcacaaacatgcctggatggaagcaacacaagaa
aaggtcaaactcgacagaagccgtgtatgtcactcttgtcggcggcagctcatggggcct
gagtttctgcgcaggcctactggggagctcatccacactcactgctacactgcagacaag
agcctctga
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