Colossoma macropomum (tambaqui): 118824329
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Entry
118824329 CDS
T09004
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmao03036
]
118824329 (sbno1)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118824329 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
118824329
NCBI-ProteinID:
XP_036450287
LinkDB
All DBs
Position
Unknown
AA seq
1410 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDLFDFDCQDNVQSPASQQSASKNALDIGLGSEAAGIVRIE
PAVPPTPTVTIRQKPQPSTTTFVLNQLNQLPSLGTIVVTKPSAGTTSRQTITVTKVVQTT
STAQRSSSSSSPTPTVCTVVSSNQEQVKLKDLLRTSNLKTNSLGELMKLKPPPDIAQPVA
TATGTKIILVTTKMMNKPAEVNNGMKKEVSSKDVARIWVNDEIKMRSFSPVNKLPVMKEE
EEPEEEEEEELGHAETYAEYMPIKLKIGERHPDPVVETSSLSSVTPPNVWYRLSIPEETI
DRGWLSALQLEAITYACQQHETFLPNGDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRKR
SLWFSVSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLI
GESQSGGKYKTRFKQLLHWCGDDFDGVIVFDECHKAKNVCPIGSSKPTKTGLAVLELQNK
LPKARVVYASATGASEPRNMAYMNRLGIWGDGTPFKEFTNFIQAVERRGVGAMEIVAMDM
KLRGMYIARQLSFQGVTFKIEEVPLTKDYIKMYNKSVRLWVSAREKFQQAANLMDAEQRM
KKSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEARTLEALEE
GGGELNDFVSTAKGVLQSLVEKHFPAPDRQKLFSLLGIDLSAKKTPSPAETTAEQKGKKR
KGSEVKKAVKKARKSGGLSGSSSDESNSGDSDEEAESDDSFKSVSSGDDEDDDDEDDYNP
FKDDSSEDEEDDPWLIRKDSKKGKIKKNKKKKKSIDPDSIQSALLASGLGSTRPAFTTPV
VKSASNTITAAKSEPEESSCVTSHDAVEDAQQMKRELLEQLEKLAEDLPPNTLDELIDEL
GGPENVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEA
ASSGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAG
EQRFASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPLV
SPPCDFEGDFFKEIRNGLIGVGLINVEDRSGVLSLDKDYNNIGKFLNRILGMEVQQQNAL
FQYFSDTLNAVVQNAKKNGRYDMGILDLGSGDEKVKKVDVKKFLTPGYSTSGHVELYTVS
VERGMSWEDATHVWAEQDGPDDGFYVQVRNNKKIAILVKEVNTKKRLFMVYRPNTGKQLK
LEMYADIRKRCKKVLSDDAKQHWIDQYKSSADICSHAYWRGNCKKASVGLQCEIGLRCRT
YYVLCGSVLSVWTKVEGVLASVSGSNVKMQIVRLRTEDGQRIVGLIIPANCVAPLTNILS
SSDQSQQLAVQQQQMWQQLHPQSISHAANT
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggatccaggacaagatctgcttcttgcagcccttagtgagagtggaatctgcccgaat
gacctatttgactttgattgtcaggacaatgtccagtcccctgcctctcagcagtcagcc
tcaaaaaatgcccttgacattggcttgggcagtgaggctgctggaatcgttagaatagaa
cccgctgtgccacccacacccactgtcacaatcagacagaagcctcaaccctcaaccacc
acatttgtcttaaatcaactgaatcagttgccatcactgggaaccatagttgtcacaaaa
ccctcagcggggaccacctcgaggcagaccatcacagtaaccaaggtggtgcaaacaaca
tcaacagcccaacgaagctcctcctcatcctcccctactcccaccgtttgcactgtggtt
tcatcgaatcaggagcaggtcaagctgaaggacctactcaggaccagtaacctgaagaca
aacagtcttggagagcttatgaagttgaaacctccacctgatatagctcagcctgttgct
acagctacaggcacaaagattattttggtcaccacaaagatgatgaataaaccagcggag
gtaaacaacggcatgaagaaagaggtgtcaagcaaagatgttgccagaatctgggtcaat
gatgaaataaaaatgcggagcttttcacccgtaaataaattaccagtaatgaaggaggaa
gaggaaccagaagaggaggaagaggaggaattgggacatgcagagacatatgcggaatac
atgccaataaaattgaagataggagagcggcatcctgaccctgtggttgagaccagctcc
ctgtcaagtgtcaccccgcccaacgtgtggtacagactttccattccagaggagacaatc
gacagaggctggttatctgctcttcagcttgaggccatcacatacgcttgtcagcaacat
gagacattccttccaaatggagatagagcagcttacctgattggtgatggtgctggtgtt
ggaaagggtagaaccattgctggcattatttatgagaattaccttcttggcaggaaaaga
tctctctggtttagtgtctcaaatgatttgaaatatgatgcagagagggacttaagagac
attggagcaaagaacattcaggttcattcattgaacaagttcaaatatgggaaaatctca
tccaaacacaatggaagtgtgaagaaaggtgtgatctttgccacatactcctccttgatt
ggagaaagccagtctggtgggaagtacaaaacaagattcaaacagttgcttcactggtgt
ggggatgactttgatggggtgatagtctttgatgagtgtcacaaagcaaaaaatgtgtgc
cctattgggtcatcaaaaccaaccaagactggactagcggttcttgagctccagaacaaa
ctgccaaaagcgcgggttgtgtatgccagtgcaacaggagcttctgagcctcggaatatg
gcttacatgaatcgtcttgggatttggggggatggaactccttttaaagagttcaccaat
tttattcaagctgttgaaagaagaggtgttggtgccatggagattgttgccatggatatg
aaattgagaggcatgtatattgctcgtcaactgagcttccaaggggtgacttttaagatt
gaggaagttcctctgactaaagactatatcaagatgtacaacaagtcagtccgtctgtgg
gtgagtgcaagagagaagtttcagcaagcagctaatttgatggatgcagagcagcgcatg
aaaaagtcaatgtggggacagttctggtcggcacatcaaaggttcttcaagtacttatgt
atcgcctccaaagtcaggagagtggtgcagcttgctcgagaggaggttaagaatggaaag
tgtgtggtcattggcctgcaatcaacaggggaagctcgaacacttgaagcactggaagaa
ggcgggggcgagctcaatgattttgtgtccactgcaaagggtgtcctacagtcactggtg
gaaaagcactttcctgctccagacagacagaagctctttagcttgctgggtatagacctg
tctgcaaagaaaacaccatcgccagcagaaacgacagcagagcagaagggcaagaagcgc
aaaggttcggaggttaagaaggcagtaaaaaaggcccgtaaatctggagggctttcaggc
agcagctcagatgagagtaactcaggagattcagatgaggaagctgaaagtgatgacagc
tttaagtcagtcagctcaggagatgatgaggatgatgatgatgaagatgactacaaccca
ttcaaggatgattccagtgaggatgaggaagatgatccttggctaattcgaaaagactct
aagaagggcaagataaagaagaacaagaagaagaaaaagagcatagacccagattccatt
caaagtgccttgttagcctctgggcttggttcaaccaggcctgctttcacaacacctgtt
gtaaaatcagcatctaacacgattactgctgccaaaagtgaaccagaggagagtagctgc
gttaccagccatgatgcagtggaggatgctcagcagatgaagagagaactgttggagcaa
ctggaaaagctggctgaggatctgcctcccaacacactggatgaacttattgatgagtta
ggaggacctgaaaatgtagcagagatgactgggcggaaaggcagagtagtcagcaatgac
gatggcagcatttcctacgaatcgagatcagaactggatgttcctgtagaaattctgaat
ctcacagagaagcagaggttcatggatggagaaaagaacatcgccataatctctgaggca
gccagctctggtatttcactacaagcagaccgtcgagtaaagaaccagaggagaagggtg
cacatgactttagaactgccttggagtgcagacagggctattcagcaatttggtagaaca
cacagatcgaaccaggtcacagcaccagagtatgtgttccttatctccgaacttgctgga
gaacaaagatttgcctctattgttgccaaaagattagagagcttgggtgctctcacccat
ggagaccgaagagccacagagactagagatctcagtcggttcaactttgacaacaaatat
ggcagaaatgctcttgaaatcgttatgaagtccattgtcaatttggattctccgttggtc
tccccaccctgtgactttgaaggagatttctttaaagaaatccgcaacggtttaattggt
gtgggattgattaatgtggaagatagatccggtgttctctcactggataaagattacaac
aacattggaaagttcctgaatcggattcttggcatggaggtccagcagcagaacgccctc
ttccagtatttctcagacactttgaatgctgttgttcagaatgccaaaaagaacggcaga
tacgacatgggaattttggatttgggctctggggatgaaaaggttaaaaaggtcgatgta
aagaagtttttgacgccaggatattccacatcaggacatgttgaactttatacggtgagt
gtagagaggggtatgtcatgggaggatgccacacacgtttgggcagaacaagatggacca
gacgatggcttctatgtgcaggtacggaataacaagaaaatagcaatcttggtaaaagag
gtcaacaccaaaaagagactcttcatggtgtacagaccaaacacagggaaacagcttaaa
ctagagatgtacgcagacattcggaagagatgtaaaaaggtcctttcagatgatgccaag
cagcactggattgatcagtacaagtcctcagcagatatttgctctcatgcctattggcgt
gggaactgcaagaaggcctcagtgggactgcagtgtgagatagggctacgctgcaggaca
tactacgttctctgtggctctgtcctaagtgtgtggaccaaagtggagggagtcttggcg
tctgtcagcggaagcaatgtgaaaatgcagatagttcgtttgagaaccgaggacggacag
cgaatagtgggcctaatcattccagcaaactgtgtggctcccctgaccaacatcctgtcc
tcgtcagaccaatctcagcaactggcagtgcagcagcaacagatgtggcagcagctgcac
ccacaaagcatcagccacgcagccaacacctag
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