Colossoma macropomum (tambaqui): 118824453
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Entry
118824453 CDS
T09004
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04510
Focal adhesion
cmao04512
ECM-receptor interaction
cmao04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118824453 (col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118824453 (col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118824453 (col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmao04147
]
118824453 (col4a2)
00536 Glycosaminoglycan binding proteins [BR:
cmao00536
]
118824453 (col4a2)
Exosome [BR:
cmao04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118824453 (col4a2)
Glycosaminoglycan binding proteins [BR:
cmao00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118824453 (col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118824453
NCBI-ProteinID:
XP_036450551
LinkDB
All DBs
Position
Unknown
AA seq
1673 aa
AA seq
DB search
MKFEVRMEGVMKTLRFLLFCLTVLLLTSEVNAGGKKYTGPCGGRDCSGGCQCYPEKGARG
HPGPLGPIGPPGPPGRQGEPGLPGSKGEKGDRGKGGNAGPKGSLGMTGVPGFLGSDGIPG
HPGQAGSRGKPGADGCKGADGDDGIPGLRGSDGAPGYPGQPGRKGEKGDPLEISVYMERF
RGDPGSPGYPGVTGVPGRPGYQGRPGPQGPRGPQGDHGPPGPPGEDPVILKGEKGAQGET
GAPGPPGNSTGPLTLPTQGSKGEKGVKGERGDWDIYAYTKGEQGITGFPGSRGEPGRNGR
PGAKGDRGYPGFPGQTGRKGEPGDAGELIYTSGTFGVGPPGPQGEHGPPGDIGPPGPKGA
PGPQGRDVVDQQIEIFGPFGPKGIKGQKGEAGEPGIPATRPGPRGFDGQSGPPGPPGPKG
SWQEHFRGPEGPRGRPGNAGAKGEKGDHGPCECRAQTSPPGSPGLPGSLGDDGMVGEWGQ
QGDQGEPGPRGNPGLPGFPGATGSPGPKGLKGVRVEVTEKGPPGDEGDPGISGEQGEPGQ
TGRNGIDGVPGFAGPPGEGPVGEPGEKGYAGRPGLPGFAGPAGRPGPVFGTAKGVRGSPG
DPGISGYDGTPGLPGIPGSCSPSGDEGQWNTAGSGNGECEALPGPPGERGPPGPPGLPGF
LGVPGPKGFAGPSGGVGLKGEQGDQGRGGPPGAMGFIGPRGDLGSPGSKGPEGNLGPSGR
PGLDGEPGLKGPEGKALEGSSGPTGDPGLPGQQGNRGPSGDRGTSGYPGMEGMPGMIGFK
GEVGPAGLQGELGKPGPPGIFGYPGVPGQAGPPGPPGNIGQQGLSGETGDRGDSGPPSSL
GLKGISGEPGSDAGLGELGLQGDPGQPGHVGRPGLSGLKGLRGSQGMTGFPGMPGNPGLK
GITGQKGDLGFPGVRGEKGFSGHKGIKGEPGLIGPPGEPPSIKMEHMKETMKGTKGDHGK
EGDPGFTGPRGSKGYPGVPGEEGHHGLPGEPSHDKGVQGSPGAQGLPGQKGMPGTTGTPG
IPGFPGMSGPRGEKGSPGAYGATGDSGLKGIKGDQGDTIDLPGPTGPRGESGLTGPSGHK
GFPGGPGERGSSGFDGIEGMKGYQGEPGLEGAPGFKGLQGFPGNQGTKGWAGVPGEAGGS
GKPGHPGQKGFPGLKGIFGLDGLKGQKGLQGIPGTDTRGLPGELGPKGEKGEIGIPSAEV
GVPGVHGFKGSSGDPGNQGEPGLPGVQGPQGTHGIPGRKGVSGDRGPRGQKGLPGFPGPT
GPSGFSSPFGPKGDRGFPGEVGITGLKGVQGDTGEKGLPGQSGVSGRKGVKGQQGMMGFP
GRPGFQGDRGPSGPKGDTGPPGFPGAPGAKGLPPVPVKVPGERGPPGLHGIRGPDGVRGE
TGPFGLPGDQGFLGPKGQKGMPGLPGIPGQPGFRGDSGSVGHPGLQGLEGAHGRPGIPGH
PGMPGRSVSVGYLLVKHSQSEQTPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAGSCL
PRFNTMPFLYCNPGDVCYYASRNDKSYWLSTTAPIPMMPVEEADIKPYISRCSVCEAPSV
AIAVHSQDITIPQCPVGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRTTPFIEC
NGAKGTCHYFANKYSFWLTSINQPFQSSPDSETLKAGQLLSRISRCQVCMKNL
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgaagtgcggatggagggcgtgatgaaaactctgaggtttctgcttttttgt
ctcactgtcctcctactgacgtcagaagttaacgcaggtggtaagaagtacaccgggcca
tgtggtggccgagactgcagtggcgggtgtcagtgttatcctgagaaaggcgccaggggt
cacccaggcccacttggtcctataggtcctccaggacctccaggacgtcagggcgagcct
ggtctcccaggttctaaaggagagaaaggtgacaggggcaagggaggcaacgcaggcccg
aaaggatcactgggaatgacaggagttccaggatttttaggatctgatggtattccaggt
cacccaggacaggcaggctctcgaggaaaacctggtgctgatggctgtaaaggagcagat
ggagatgatggaataccaggactgcgaggatctgatggtgcaccaggatacccaggtcag
ccaggaaggaagggtgagaagggggaccctctggaaatatcggtttacatggagagattt
cggggagatccagggtcaccaggatatccaggagtcactggcgttcctggaaggccaggc
tatcaaggacggccaggtcctcaaggtcctcggggtccacaaggtgatcacggacctcca
ggtccaccgggtgaagaccctgtaatcctgaagggagaaaaaggagcacagggcgaaact
ggagcgccaggaccaccagggaactcaacaggaccactcacactgcccacccagggcagc
aaaggtgagaaaggtgtgaaaggtgaacgaggagactgggatatatatgcatacaccaaa
ggagagcaaggcattacaggctttccagggtcacggggagaaccaggaagaaatggaagg
ccaggagcaaagggtgacagggggtacccaggctttccaggacagacagggcgcaagggg
gagccaggagacgcaggagaactgatctatacatctggtacctttggagttggtcctcca
ggccctcaaggagaacatgggccaccaggagatattggccctccagggcctaaaggagca
ccaggcccccaggggcgtgatgttgtggaccagcaaatagagatatttggccctttcgga
cccaagggcataaagggacagaagggtgaggctggagaacctgggatcccagctacacgc
cctggtcctcgaggctttgacggacaatcaggaccacctgggccacctggacccaaggga
tcatggcaggaacatttcagaggtcctgaaggaccacgtggacgtccaggaaatgcagga
gccaaaggggagaaaggtgaccatggtccgtgtgaatgcagagcccagacctctcctcct
ggatctccgggtttacctggcagtcttggtgacgatggcatggtaggagagtggggtcag
cagggagatcaaggagagccaggacccagaggaaaccctggattgcctggctttccaggt
gctacagggtctcctggaccgaagggacttaaaggagtacgcgtggaggttacagagaaa
ggaccgcctggagatgaaggagacccgggcatatcaggtgagcaaggggagcctggccag
actggacgtaatgggatagatggtgtccctggatttgctggtccacctggagagggtcca
gttggagagcctggagagaagggctacgcaggcaggccgggtttgccaggctttgccggg
cctgcaggaagaccaggtccagtgtttggaacagccaagggtgtaagaggttctcctgga
gatccagggattagtggttatgatggaactccaggcctacctggtattccaggaagctgt
agtccaagcggagacgaaggccagtggaatacagcaggaagtggcaacggggagtgtgag
gcactaccaggacccccaggagagagaggacccccaggaccccctggattgccaggattt
ctaggtgtacctggtcctaaagggtttgcaggacctagtggaggagtgggacttaaggga
gagcaaggagaccagggcagaggaggaccacctggagcaatgggtttcattggacctcgt
ggagacttgggcagtcctggttctaaaggtccagaggggaatcttggtccttccggtagg
ccaggcttagatggtgagccagggcttaagggtcctgaaggtaaggctctagaaggttct
tctggacccacaggagacccagggttacccggacagcaaggcaacagaggaccctctgga
gatcgtggcacaagtggatatccaggaatggagggaatgcctgggatgattggcttcaag
ggtgaagtaggtcctgcaggcttacaaggagagttaggaaaacctggaccaccaggaata
tttggctaccctggggtacccggacaagcaggacccccaggacctccaggcaacataggg
caacaaggtctcagtggagaaactggtgatcgtggggacagtggtccccctagctcttta
ggactgaagggtattagtggagagcctggaagtgatgctggactaggtgaacttgggctt
cagggagatccaggacaacctggccatgttggtcggcctggtctttctggacttaaaggt
ttgagaggctctcagggcatgacaggctttccaggaatgcctgggaatcctggtctgaag
ggcatcaccggacaaaaaggggaccttggctttccaggcgtaagaggagaaaaaggattc
agtggccacaaggggataaaaggtgaaccagggcttattggccctccaggcgaaccacca
tccattaaaatggaacatatgaaagagaccatgaaaggcacaaaaggtgaccatggaaaa
gaaggagatccaggtttcactgggccgcgaggttctaaaggttacccgggggttccagga
gaagaggggcatcatggattacctggagaacccagccatgataagggtgtacaaggatct
cctggagctcagggactacctgggcaaaaggggatgccgggaactacaggaactccagga
attcctggttttcctggaatgagtggaccccggggggagaaaggttcacctggtgcatat
ggagcaacaggagattctggactcaaggggatcaaaggtgaccagggtgataccatagac
ctccctggacccacaggaccaagaggggaatctggtcttactggaccttcagggcataag
ggttttccaggtgggcctggagaaagaggaagttctggttttgatggcattgaaggaatg
aaagggtatcaaggtgaacctggactggaaggggcaccaggttttaaagggctacagggt
tttccaggaaaccagggtactaagggttgggcaggagtgccgggagaggcagggggcagt
ggtaaaccaggccatcctggacaaaaaggctttcctggacttaaaggaatttttgggttg
gatggacttaaaggtcaaaaaggtcttcaaggcattccaggtactgacacccgggggtta
ccaggtgagcttggaccgaaaggggaaaaaggagagataggcattcccagcgcagaggtt
ggtgtcccaggggtccatggctttaagggttcatcaggagatccaggtaatcagggtgaa
ccaggtcttccaggtgttcaagggcctcaagggacacatggaatccctggcagaaagggt
gtgtcaggagatagaggaccacgtgggcagaaaggtcttccaggttttcctggacccact
ggtccttcaggtttttcatctccatttggacctaaaggagatcgaggctttccaggggaa
gttggaatcacaggacttaaaggggttcagggggacacaggagagaaaggactacctgga
cagtctggagtgtcaggaagaaaaggtgtaaaaggacagcaaggaatgatgggattccca
ggaagaccaggattccagggtgatagaggcccttctggtccaaaaggagacactggacca
ccgggctttcctggtgcccctggtgctaaggggctgcctccagttcctgtgaaggtacca
ggagaaagagggccgcctggtctgcatggtattcgtggaccagatggagtcagaggggag
acaggcccgtttggactccctggagatcaagggtttttgggaccaaaggggcagaagggg
atgccagggctacctggaataccaggacaaccaggttttcgtggagattccggatcagtg
ggccatccaggcctccagggattagaaggggcccatgggcgtcctggtattccaggtcat
ccgggtatgccagggcgaagtgtcagtgttggatacctgctggtgaaacacagtcagtct
gagcagacacccatgtgccctgtgggaatgtcaaagctgtgggatggctacagtctgctt
tattttgaagggcaagagaaagctcataatcaggacctgggtcttgcaggctcttgtctt
ccccgtttcaacaccatgccgttcttgtactgcaatcccggtgacgtgtgctactatgcc
agtcgcaatgacaaatcctattggctctccacaactgcccctattcccatgatgcctgtg
gaggaggcagacatcaaaccatacataagccgctgttcagtgtgcgaagctccatctgtg
gctatagctgtgcacagtcaggatataactattccacagtgccctgtaggctggagaagc
ttgtggattggctattctttccttatgcacacggcagctggagacgagggaggtggtcag
tcactggtgtctccaggctcatgtctggaggacttccgtacaactcccttcatcgagtgt
aacggagccaagggcacctgccactactttgctaacaagtacagtttctggctgacatcc
atcaaccagcccttccagagttcccctgactccgagactctaaaagccgggcagcttctc
tcacgcatcagccgctgccaggtctgcatgaagaacctgtga
DBGET
integrated database retrieval system
