Colossoma macropomum (tambaqui): 118824574 Help Entry 118824574         CDS       T09004                                  Symbol col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism cmao  Colossoma macropomum (tambaqui) Pathway cmao04382   Cornified envelope formation cmao04510   Focal adhesion cmao04512   ECM-receptor interaction cmao04518   Integrin signaling cmao04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cmao00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     118824574 (col4a1)    04518 Integrin signaling     118824574 (col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     118824574 (col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     118824574 (col4a1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     118824574 (col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cmao04147]     118824574 (col4a1)    00536 Glycosaminoglycan binding proteins [BR:cmao00536]     118824574 (col4a1) Exosome [BR:cmao04147]  Exosomal proteins   Exosomal proteins of other cancer cells    118824574 (col4a1) Glycosaminoglycan binding proteins [BR:cmao00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    118824574 (col4a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  118824574 NCBI-ProteinID:  XP_036450761 LinkDB All DBs Position Unknown AA seq 1637 aa AA seqDB search MLLSGGTLFLVAAVLSGVHQSRAEGCSGSSCGKCDCSGVKGAKGERGFPGLQGNMGFPGM QGHEGPPGPMGPKGDLGEPGAPGIKGARGPSGAPGFPGNPGLPGLPGQDGPPGPPGIPGC NGTKGERGIDGISGLPGLQGPPGIPGIPGMKGDPGGFIGGFLPQKGEKGFPGHSGLPGSP GNPGPQGPIGPPGPTGLKGYPGPPGPPGPPGTLMFMGAKGDKGEQGPRGPPGPVGTLQPQ GQDVEKHYVPGPPGDRGDKGEKGDKCSVYDAGIKGEPGPPGPPGKAGKDGLDGATGEKGD SGFPGHNGLKGDKGERGPPGYGDGAPGPPGLPGIPGPQGERGYPGQPGDPGPPGRHFEGP PGERGFPGEIGQKGDKGVDGESLRGPPGADGAAGPPGPPGPLSEPCNIERGNPGPPGPPG LMGEVGQKGDQGDTCTQCSAFGPPGLPGPPGPKGQQGFPGPAGSKGEKGLPGLVGVPGGP GRDGSPGLIGAPGAQGEPGDIYLAPHLKGEKGYPGLPGSRGFPGIDGLPGKDGRPGQQGP KGEPARVGIKGERGRDGDPGTPGPPGERGPPGLPGIGRPGESGEKGSPGQPGVPGRPGIP GPKGEPGKGVSSPGPEGPPGPRGESGIPGLQGERGPPGDQGLPGFPGLKGDPGLPGIGLP GPPGPKGYSGIPGAPGLPGEPGRPGQDGIPGHAGAPGQKGEPGAGFRGPKGSIGQPGVPG FPGEKGNVGMTGVPGTEGRTGPPGPQGVKGERGPPGAHGLAGPPGPPGPGEPGLPGPMGP PGEPGPFGQIGEKGEKGLPGFPGLAMPGPKGERGTPGLPGFPGPKGLPGEPGHPGQDGMP GERGPKGEMGIMGAPGSPGFQGGIGVPGSVGPRGDPGLTGPRGEFGEPGPKGERGEQGKR GPPGNLTEVDMDNMKGEKGDAGDRGDPGPTGERGYPGADGDPGMPGKDGMPGSPGQPGEK GDPGDPGQSGPPGQPGIKGSIGEMGIPGVSGPKGSKGTSGTPGHHGFKGAEGPKGDKGVS GLPGIGIPGLPGEKGQMGQPGFPGESGQKGEKGAVGIPGSPGSPGTKGDIGPIGYPGSPG VPGEKGVVGLPGSPGEPGFPGRPGEPGLQGPPGPQGEKGDPGIDGIPGSSGERGDPGVPG RGFPGTPGQLGIKGDRGNPGLPGTPGIPGIPGTKGEKGLPGFEGIQGQPGERGLPGPSME GPKGDRGAQGEPGEPGQIGAPGPTGVPGHPGEKGERGDQGFTGPQGTQGLKGDKGFTGLP GEPGLPGYNGPKGELGIQGVPGFPGMKGEAGHVGVKGEAGDRGFPGAKGNEGPPGPPGPH TFIKGDIGFPGPQGPAGLPGPQGYPGAKGQQGLMGIQGIKGEDGEPGYNGLSGAKGEPGP VGPAGPRGYPGPPGPDGIPGQVGPPGPSSMDHGFLVTRHSQSVEVPLCPQGTTLIYDGYS LLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPMPMS MAPVTGESIKPFISRCAVCEAPAMVIAVHSQTVAIPPCPHGWISLWIGYSFVMHTSAGAE GSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEDDEMFRKPVPTTLKA GNLRTHISRCQVCMKRT NT seq 4914 nt NT seq  +upstreamnt  +downstreamnt atgctcctctcaggtggcacactgtttcttgtggcagctgttttgtccggcgtacaccag agcagagctgagggatgttctggatcatcatgtgggaagtgtgactgcagtggtgtaaag ggggcaaagggtgagagagggttccctggcttgcaaggcaatatgggatttccaggtatg caggggcatgagggtcctccagggccaatgggaccaaagggggatcttggagagccgggc gcccctggaataaaaggagcacgtggaccttctggcgcgcctggtttcccaggaaacccc ggtctgccgggtctcccaggtcaagatggcccaccaggaccaccaggtattccagggtgc aatggaacaaaaggggagagaggtattgatggaatatcaggcttaccaggactgcaagga ccaccaggtattccaggtattccaggcatgaagggagatccaggtggttttattggtggt ttccttcctcagaaaggagaaaaaggatttccaggacactcaggattaccaggatcacct ggaaaccctggaccacaaggaccaattggcccacctggaccaactgggcttaaaggatat cctggtcctcctggtcctcctggtccacctggaacgctcatgtttatgggtgcgaagggt gacaagggtgaacaaggcccccgaggtcctccaggccctgtaggaaccctgcaaccacaa ggtcaagatgttgagaaacattatgtacctggaccaccgggggatagaggagacaaagga gaaaaaggagacaaatgctcagtgtatgacgcaggaatcaagggtgaacctggacctccc gggccgccaggaaaagcaggaaaggatggactagatggagctacgggggaaaaaggtgac tctggttttcctggtcacaatggcttgaaaggggacaagggagagagaggaccaccagga tatggtgatggtgcgcctggccctcctggtctaccaggcattcctgggccacaaggagag agaggataccctgggcagcctggagatcctggtcccccaggcaggcactttgagggtcct cctggagagagaggtttccctggagagattggccagaaaggagacaaaggtgtcgatgga gagtctctaaggggacctccgggagctgatggagctgctggtccacctggacctccagga ccattaagtgaaccgtgtaacatagaacgtggaaatccaggcccccccggacctcctggg ttgatgggagaagttggacagaaaggtgaccaaggagacacttgcacacaatgttctgca ttcgggcctccaggtttacctggtcctccgggaccgaaaggacagcaaggtttccctggc ccagcaggcagtaaaggagaaaagggtctgcctggacttgttggagttcctggaggccct ggtagagatggttccccaggtttgataggtgctcctggggcacagggtgagccaggcgat atctatctggcaccacatctgaagggagagaaaggctatcctggcctccctggcagcagg ggattcccaggtatagatggacttcctgggaaagatggacgtccaggtcaacaaggacct aaaggagaaccagccagagtaggtattaagggagaacgtggtcgagatggagatccaggt acccctggacctcctggtgagaggggacccccaggtctgccagggattggtcggccagga gagtctggagagaagggcagtccaggacaacctggtgtgccaggaagaccaggaatacca ggtcctaaaggtgaacctggaaaaggtgtgagttcaccaggacctgagggtccaccagga cctcgtggagaaagtggaatacctggccttcaaggtgaaaggggtcctcctggcgatcaa ggcttgccaggattcccagggctgaaaggtgaccctggtcttccaggaattggacttcct ggcccaccagggccaaaaggatactctggtataccaggtgcccctggactccctggagag cctggtcgcccaggccaggacggcattcctggacatgcaggagcaccaggacaaaaaggt gaacctggtgctggctttcgaggacccaagggctctattggacaaccaggagtgccaggg tttccaggtgaaaagggtaatgtaggaatgacaggagtccctggaacagaaggacgcact ggaccacctggtcctcaaggtgtaaaaggtgaacggggacctcctggagctcatggtttg gcgggaccacctggacccccaggacctggtgaacctggactacctggaccaatgggaccc cctggagaacctggtccctttggtcaaattggtgaaaagggagagaaaggtctcccaggt ttccctggtctagcaatgcctggtcctaagggtgaaagaggcactcctggtttacctgga ttcccaggacctaaggggttgccaggggagccaggacatcctggacaagatggtatgcct ggtgagagaggtcctaaaggagagatgggaataatgggagcgcctggctcacctggattc caaggtggcataggagtccctggttcagttggaccaagaggtgaccctggtttgactggg cctaggggagagtttggtgaaccaggtcccaaaggggaaagaggagaacaaggaaaacgt gggccacctgggaatttgactgaggtggacatggacaacatgaaaggggagaaaggagat gctggagacagaggtgatcctggtcctacaggagagagaggctacccaggagcggatgga gatcctggaatgcctggaaaagatggaatgcctggttcaccaggacaaccaggtgagaaa ggtgaccctggagatcctgggcaatctggaccacctggtcagcccggaataaaaggcagc ataggagaaatgggaattccaggagtaagtgggccaaagggttccaaaggtacaagtggg acacctggccatcatgggtttaagggtgctgaaggaccaaaaggtgacaagggagtttca ggtctgccagggataggaatccctggcctccctggcgagaagggtcaaatgggccaaccc ggtttccctggggagtccggacaaaagggggaaaaaggtgcagtgggaatcccaggaagt ccaggaagtcccggaacgaaaggagatatagggcctattggttatccaggtagccctggg gtaccaggagagaaaggtgttgtggggctacctgggtcaccaggagaacctggttttccc ggacggccaggtgagcctggtctacagggtccaccagggccacagggagagaaaggagat ccagggatagatggcattcctggatcctctggagagaggggtgatccaggtgtacctggt agaggctttcctggaacgcctggacaattgggaatcaaaggtgatagaggcaacccaggt ctccctggcactcctggaattccaggtatccctggtaccaaaggagagaagggcttgcca ggcttcgaggggatccagggtcaacctggagaaagaggactaccagggccatccatggag ggacctaaaggtgatagaggagctcaaggggagccaggagagccagggcagattggtgct ccaggtccaacaggtgttccaggacatcctggagagaaaggagagaggggagaccagggt ttcacaggcccacagggtactcagggtttaaaaggcgataaaggtttcactggacttcca ggtgagcctggcttaccaggttataatggaccaaagggtgagttgggaattcaaggtgtt cctggcttcccaggaatgaaaggtgaagctggacatgtaggtgtcaagggtgaggctggt gacagaggattccctggagctaaaggtaatgaaggcccccctggacctcctgggccacat actttcataaaaggagatattggcttcccgggaccgcagggtccagcaggtctgcctggg cctcaggggtaccctggagctaaaggacagcaaggattgatgggtatacagggtattaaa ggagaggatggggaacctgggtacaatgggctttctggagctaaaggagagcctgggcct gttggacctgctggacccagaggatatccaggccccccaggtcctgatggtatcccaggt caggttggccctcctggcccttcctctatggaccatggcttccttgtaactcgccacagt cagtctgtagaggtgccactgtgtcctcaaggcaccactctaatctacgatggatactca ctcctctatgtgcaaggaaacgagcgatcccacggccaagacctgggtacggctggtagc tgcctacggaagttcagccccatgcctttccttttctgcaacattaacaatgtgtgtaac tttgcctctcgtaacgactactcctactggctcacctctcctgagcccatgcctatgagc atggcacccgtcactggcgagagcatcaaaccttttatcagcagatgtgcagtgtgtgag gctcctgccatggtgattgctgtgcacagtcagactgttgcaatcccaccctgccctcat ggttggatctctctctggattggatattcctttgtcatgcacaccagtgcgggtgctgag ggttctggtcaggctctggcctcccctggctcctgtctggaggagttccgctctgctccc ttcattgaatgtcatggccgcggcacctgcaactactatgccaactcctacagcttctgg ctggcaaccatcgaggatgatgagatgtttaggaaacctgtccccactacgctaaaggcc gggaatctgcggacccacatcagccggtgtcaagtgtgtatgaagaggacttag

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