Colossoma macropomum (tambaqui): 118824840
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Entry
118824840 CDS
T09004
Symbol
clip1b
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
118824840 (clip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmao03036
]
118824840 (clip1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cmao04812
]
118824840 (clip1b)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118824840 (clip1b)
Cytoskeleton proteins [BR:
cmao04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
118824840 (clip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
ACBP4_C
CAMP_factor
SlyX
Motif
Other DBs
NCBI-GeneID:
118824840
NCBI-ProteinID:
XP_036451165
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MSTGKPSGLKPPSKIGKPTGVPTKTSPSSATPKPITSPGAGTPAVNDSVAEFTVGERVWV
NGNKPGYVQFIGVTQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEDLRGIFTRPSKLSR
APVPERETNGAQTLPAQVSSAVTAAADGQASTANQTSTNLATAASGSVANLSETDSAKKG
KRELKLGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGARYFQCLPK
YGLFAPTHKVTRIGFPSTTKAKSSRRRSTLQHSPSASSVSSLSSLASSIGGKPSRAGLLT
ETSARYARKISGTTAMQEALKEKQQHIEQLLAERDLERTEVARATSHAGEVQQELALLRQ
GQEQYALEMEAKLDQLRRLVETADREKVELLNQLEEEKRKVEDLQFRVEEACITKGDLET
QTKLEHAHIKELEQSLLFEKTKADKLQRELEDTRVATVSERSRIMELEKEVAELQLRLRS
QRAEAGSASPPLQDKRVRELSSELEAKHKELLLLQQRLSSSDQENTSLQHQLNDLRQKLD
TAAEESKSTALSLQDMERSMQADREQLKQLCSEKEKLEEEMASRQLQERRLNEEHEGGKK
KLQEKLGQVEQELNKAQEKSTDLQQQVAELQLFKDKAQSTQSSETVEQLKQKNQELCQEL
EALKQQNSKFQEELSFSKEQLSSENQRIGSLCKEIEELKLAANQKSQRLAALQEENGKLA
QELDSSRQVGSKQQTLDGERLTLNSELEINERVNSNTVICEKDKELEALRNEIAVLREEN
AMAKTLQAAVESLERDKVQLQGRVHSLQLKLEGKPVENQEQGSTGDAVINQLREEKEFAE
GQINFLNSVIVDLQRKNEELKVKLKKMALAEFNGNEENEGSGEVKKKKKPPPRVFCDICD
CFDLHDTEDCPTQMQSPDSPPHSTYHGSRSSERPYCDICEAFGHWTDSCNDDQTF
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggggaagccaagtggtctcaagccacccagtaagattgggaagcctactggt
gtaccaactaagacctccccttcctcagctactcccaaacctataacatctccaggtgct
ggcacccctgctgttaatgactcagtagcagaattcactgtgggcgaacgtgtgtgggtg
aacggaaataagccgggctatgttcagttcatcggtgtgacccagttcgcgccaggacag
tgggcaggcattgttttggatgagcccatagggaagaatgatggctctgtggctggagtg
cggtactttcagtgcgaagacttacgaggtatcttcacccgtccttctaaactgtcccgg
gctccagtcccagagcgcgagaccaatggtgcacagaccttgccagcccaggtgtcctct
gctgtcaccgctgctgctgacggtcaagcctccactgctaaccaaacctcaacaaacctg
gccacagcggccagtggttctgttgctaacctgtccgagacagactcggccaagaaggga
aaacgggagctgaagctgggggaccgtgtgctggttggtggaacaaaggcaggcgttgtg
cgcttccttggtgagactgactttgcgaagggggaatggtgtggggtggagcttgatgaa
ccgcttggcaaaaacgatggagcagtggctggcgctaggtatttccagtgtctgccaaag
tatggcctgtttgctcctacgcacaaagtgacccgcattggctttccctccaccaccaaa
gccaaaagctcaaggcgcaggtccaccctacagcacagtcccagcgcctcttcagttagc
tccctgagctcacttgcctcttcaataggaggcaaacccagtcgtgcaggcctgttgaca
gagacatcggcccgctatgcacggaagatctcggggaccacagctatgcaggaggctctg
aaggagaagcagcagcatatagaacagctcctggctgagcgggatctagagaggacagag
gtggccagagccactagccatgcaggagaggtgcagcaggaacttgccttgctcagacaa
ggccaggagcagtacgctttggagatggaggctaagttggaccagttacgcaggcttgtg
gagactgcagacagggaaaaagtggagttgttgaatcagcttgaagaggaaaaaaggaaa
gtagaggatcttcagtttcgtgtagaagaagcttgcattaccaaaggtgatctagagacg
cagaccaaactggagcatgcccacattaaggagctcgaacagagccttctctttgaaaag
accaaagctgataaactccagagggagttagaggatactagggtggccactgtgtctgag
aggtcacggatcatggagttggaaaaggaagtggccgagctgcaactacgcctgcgatct
cagcgagcagaagctggatcagcctcacctccgttacaggacaaaagggtcagagagctg
agcagtgagctggaggccaaacacaaagaattgcttcttctccaacagagactcagctcc
tctgatcaggagaacacctcacttcagcatcagctgaatgacttgaggcaaaaacttgac
acggcagcagaggaaagtaaaagcacagcactctccttgcaagacatggagaggagcatg
caggcggacagggagcaactgaaacagctatgcagtgagaaggagaagctagaggaggag
atggcctccaggcagctgcaggagcgcagacttaacgaggagcatgaggggggaaagaag
aagctgcaagagaaactaggccaggtggagcaggagctgaacaaagcacaggagaagagc
acagacctccaacagcaggtggcagagctgcagctgttcaaggacaaagctcagagtacc
caatcttcagagactgtggaacaactgaaacagaaaaatcaggagctgtgccaagagctt
gaagccctgaagcagcagaactccaagtttcaggaggagctcagtttctccaaggagcag
ctcagctctgagaaccagcgcattggaagcctgtgcaaagaaattgaggagctaaagcta
gcagccaatcagaagtcacagaggctggcagcactccaggaggagaatgggaagttggct
caggagctggacagcagccggcaggtgggctctaagcagcagacgcttgacggtgaacgc
ctgactctcaacagtgagttggagattaatgagagggtaaactccaatacagtaatatgt
gagaaggacaaagaactggaggcgttaagaaatgagattgcagtgctgcgtgaagagaat
gccatggctaaaacgctgcaggcggcggtggagtctctggaaagggacaaggtgcagcta
cagggcagagtgcacagcctgcagctgaagctggagggcaagccagttgagaaccaagaa
cagggttctacaggtgatgcagttataaaccagcttagagaagagaaagagtttgccgag
ggacagatcaacttcctcaactcagtcatcgtggatctacagagaaagaatgaggagctg
aaggtgaagctgaagaaaatggccttggctgaattcaatgggaatgaagagaatgaaggt
tctggtgaggttaaaaagaagaagaaaccccctcctcgtgttttctgtgatatctgtgac
tgttttgacctacacgacaccgaagactgccccacccaaatgcagtcccccgactcacct
cctcacagtacgtaccatggcagtcggagcagcgagcggccctactgcgacatctgcgag
gcgttcggccactggacggactcctgcaacgatgaccaaaccttctag
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