Colossoma macropomum (tambaqui): 118825163
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Entry
118825163 CDS
T09004
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03030
DNA replication
cmao03410
Base excision repair
cmao03420
Nucleotide excision repair
cmao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118825163 (rfc3)
03410 Base excision repair
118825163 (rfc3)
03420 Nucleotide excision repair
118825163 (rfc3)
03430 Mismatch repair
118825163 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmao03032
]
118825163 (rfc3)
03036 Chromosome and associated proteins [BR:
cmao03036
]
118825163 (rfc3)
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118825163 (rfc3)
DNA replication proteins [BR:
cmao03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118825163 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
118825163 (rfc3)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
118825163 (rfc3)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118825163 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
118825163 (rfc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_lid_RFC1
AAA_22
AAA_11
AAA_16
nSTAND6
MTC2_N
Sigma54_activ_2
ABC_tran
AAA_5
Motif
Other DBs
NCBI-GeneID:
118825163
NCBI-ProteinID:
XP_036451610
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPASLAKLDYHKEQANQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGNSDRVVIQELIKTVAQSQQ
IQSSTQREFKVVILTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVISPIRSRCL
AVRVPLPSTEEVCSVLTSVCKKEGLLLPVELAKRIAEKSGRNLRKALLMCEACRVQQYPF
SADQDIPETDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPEIIMKGLVSELL
NNCDGHLKAEVAQMAAYYEHRLQLGNKAIYHLEAFVAKFMAIYKKFMEDGLDNLMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgtgggtcgataagtaccggccggcgtctctggcgaagctggactaccataaa
gagcaagcaaaccagctgagaaacctggtacaatgtggagacttccctcatctgcttgtt
tacggtccatctggcgctggcaagaagactcgaataatgtgtctccttcgtgagctgtac
ggtgctggggtggagaaactgcgtattgaacaccagactatcgtagctccatctaaaaag
aaaattgaaatcaacacaattgccagcaactaccatttggaggtgaatccaagtgacgca
gggaacagtgaccgtgttgtcatccaagagctgattaaaacagtggctcagtctcagcag
atccagtccagcacgcaaagagagttcaaagttgtgatcctgacggaggtggaccgcctc
accaaagacgcgcagcacgccctgcgccgcaccatggagaaatacatgtccacctgccgc
ctcatcctgtgctgcaactccacctctaaagtgatctcacctatccggagcaggtgtctg
gctgtaagagtgccattgcccagcacagaagaggtgtgcagtgttctgacaagcgtgtgc
aagaaggaagggctgcttctgccagtggagctggctaaacggatcgcagagaagtctggt
cgcaaccttcgcaaagctctgctgatgtgcgaggcctgtcgagttcaacagtaccctttc
tctgccgatcaggacatccctgaaacagactgggaggtgtatctcagagagactgcaaac
gccatcgtcagccagcagagcccccaaaggcttttggaagttcgggcaagactctatgaa
ctcttaacccactgcatcccaccagaaatcatcatgaagggcctggtgtctgagctgctg
aataactgtgatggccatctgaaagctgaggtggctcagatggctgcctattacgaacat
agactacagttgggcaacaaagccatttaccacctggaggcctttgtggccaagtttatg
gctatctacaagaagttcatggaggatgggctcgacaacttgatgttctaa
DBGET
integrated database retrieval system