Colossoma macropomum (tambaqui): 118825474
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Entry
118825474 CDS
T09004
Symbol
copa
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118825474 (copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmao04147
]
118825474 (copa)
Membrane trafficking [BR:
cmao04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
118825474 (copa)
Exosome [BR:
cmao04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118825474 (copa)
Exosomal proteins of bladder cancer cells
118825474 (copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
118825474
NCBI-ProteinID:
XP_036451975
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWLLSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETE
VRGITGVDLFGASDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMLVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPRDSDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLNIDPTEYRFK
LALVNRKYEEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGMDEEAEALKETFDL
EKEMIPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGRAGQMAADLDMDAP
GGEGWGEDAELHLDDDGFMDAQDGLGDEVGVGKEEGGGWEVEEDLDLPPELDVPAGGGGG
AEGEGFFVPPTKGVSPTQMWCNNSQLPVDHLLAGSFETAMRLLHDQVGVVQFGPYKQLFL
QTFSRGRTCYLGLPSLPCLQGHPQRNWKDSGMKAGLPAVGLRLADLIARLQQCYQMTTAG
RFEEAVERFRAILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMETERKKLPKDTLEQ
QKRLCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLKNFKTAAGFARRLLELGPKPEVAQQ
TRKILAACEKTLTDAHQLNYDPHNPFDLCAASFTPLYRGRPVEKCPLSGACYCPTYKGQV
CRVTQVTEIGKEVIGLRISSLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaaattcgagaccaagtctgctcgagtgaaggggctgagtttccacccgaag
cggccctggatcctcgccagcctgcacaacggcgtcatccagctgtgggactatcgcatg
tgcaccctcatcgacaagttcgacgagcacgatggtccggtcagagggatcgacttccac
aaacagcagcctctgtttgtctcaggaggagacgactacaaaataaaggtgtggaattat
aaactgcgccgctgtctcttcaccctgctgggtcacctggactacatccgcaccaccttc
ttccaccatgagtacccctggctcctcagcgcctccgatgatcagaccatccgcatctgg
aactggcagtccaggacgtgtgtgtgtgttctgacgggtcataatcactacgtgatgtgc
gctcagttccacccgtcggaggacctggtggtctcggccagtctggatcagaccgtgcga
gtgtgggatatttccggtttgaggaagaagaacctgtctccgggcgccgtggagacggag
gtccgtggcatcacgggagtggatctgttcggggcgtcggacgctgtggtcaaacacgtg
ctggagggtcacgatcgaggggtcaactgggccgcgttccaccccagcatgcccctaata
gtgtcgggagctgatgaccggcaggtgaagatctggaggatgaacgaatcaaaggcgtgg
gagttggacacctgcagggggcactacaacaacgtctcgtgtgccgtcttccaccctcgt
caggagctgatcctgtccaactccgaggataagagcatccgtgtgtgggacatgtccaaa
cgcaccggtgtgcagactttccgcagagaccacgaccgcttctgggtgctcggagctcat
cccaacctcaacctgttcgccgcaggtcatgacagcgggatgctggtgtttaagctggaa
cgtgagcgtcctgcgtacgctgtgtatggaaacatgctttactatgtgaaggatcgcttc
ctgcgccagctcgacttcaacagcagcaaagacactgccgtcatgcagctgcgcagcggc
tccaagttccccgtgttcagcatgtcctacaaccctgcagagaacgccgtcctgctctgc
actagagccactaatctggagaacagcacgtatgacctgtactccatcccccgagacagc
gactctcagaaccctgatgctccggaggggaagcgctcctcaggactgaccgcagtttgg
gtggccaggaaccgctttgccgttctggaccgcatgcactcgctgctgataaagaacctg
aagaacgagatcgtgaagaaggtgcaggttccgagctgtgaggagatcttctacgctgga
acgggttctctgctgctgcgggacgctgacggagtcacgctgttcgacgtccagcagaag
cgatcgctcgccaccgttaagatcgccaaagtcaaatatgtggtgtggagtgcagacacc
agccacgtcgccctgctggccaaacacgccatcatgatctgcaacaggaagttggagagt
ctgtgtaacatccacgagaacatccgtgtgaagagtggggcgtgggacgagagcggagtg
ttcatctacaccacctccaaccacatcaaatacgctctgacctctggtgatcacggtata
atccgcacgctggacctgcccatctacgtgacgcgtgtgagggggaacagcgtgtactgt
ctggaccgcgagtgccgaccccgcgtcctcaacatcgaccccacagagtaccgctttaaa
ctcgccctcgtcaaccgcaagtacgaggaggtactgcacatggtgcgtaacgctaagctg
gtgggacagtccatcatcgcctacctgcagaagaagggctacccagaggtggcgctgcac
ttcgtgaaggatgagaagactcgcttcagcctggctctggagtgcggcaacatcgaggtg
gcgctggaggctgcgaaggccctggatgagcggagctgctgggagcgtctgggcgaggct
gcgctgctgcagggtcaccaccaggtggtggagatgtgctaccagagaaccaagaacttc
gacaagctcaccttcctgtacctgatcaccggaaacctggccaagctgaggaagatgatg
aagatcgctgagatcaggaaggatatgagtggtcactatcaggccgctctgtacctggga
gacgtcagcgagagagtgcgcatcctcaaaaactgcgggcagaagtctctggcgtatctg
accgctgccacgcacggcatggacgaggaggccgaggccctgaaggagacctttgaccta
gagaaggagatgatcccggaggtggacccgaacgcccagctgctgcagcctcctccccca
atcaacccgttggacactaactggcccctgctgaccgtctccaagggcttcttcgaggga
gccatcgcagccaagggaagggccggtcagatggcggctgatctggacatggacgctcct
ggaggagaaggctggggagaggatgctgaacttcacctggacgatgatggtttcatggat
gctcaggacggtctgggtgatgaagtcggtgtggggaaggaggagggaggaggctgggag
gtggaagaggacctggacctgcccccagaactggatgtgcctgctggtggagggggagga
gctgaaggagaaggcttctttgtcccacccactaaaggtgttagccccacccagatgtgg
tgtaataactcccagctgcctgttgaccacctgctcgctggatccttcgagacagccatg
aggttactccatgatcaggtgggtgtggtccagtttggtccgtataagcagctgttcctg
cagacgttctcccgcggcaggacgtgttacctggggctgccgtcgctgccctgcctgcag
ggtcaccctcagaggaactggaaggacagcgggatgaaggccggtctgccggcagtgggc
ctgcgcctcgccgacctcatcgcccgcctgcagcagtgctaccagatgaccacagctgga
cgtttcgaggaggctgtggagcgctttagagctattctattgtcagtgccccttctggtg
gtggacaacaaacaggagatcgcagaggctcagcagttgatcaccatctgcagagagtac
atagtgggtctcacgatggaaacagagcggaagaagctgcccaaagacactctggagcag
cagaagaggctgtgtgagatggcggcgtacttcacccactgtaacctgcagccggtgcac
atggtgctggtgttgcgcacggcgctcaatctcttcttcaaactcaaaaactttaaaaca
gccgcaggattcgcacgacgcctcctcgagctcggacccaaacctgaagtagcacagcag
acgcgtaagatcttggcggcgtgtgagaagacgctgaccgacgcccaccagctgaactac
gacccccataacccctttgacctctgcgcagcctctttcaccccgctgtaccgcggacgg
cccgtggagaagtgcccgctgtccggcgcctgttactgccccacgtacaaaggccaggtc
tgcagggtcacacaggtaacggagatcggtaaggaggtgattggtctgcggatcagctcc
ctgcagttccgctga
DBGET
integrated database retrieval system
