Colossoma macropomum (tambaqui): 118825493 Help Entry 118825493         CDS       T09004                                  Name (RefSeq) synaptopodin-2 isoform X1   KO K24066   synaptopodin-2 Organism cmao  Colossoma macropomum (tambaqui) Pathway cmao04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cmao00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     118825493  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:cmao04990]     118825493 Domain-containing proteins not elsewhere classified [BR:cmao04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    118825493 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PDZ PDZ_6 Motif Other DBs NCBI-GeneID:  118825493 NCBI-ProteinID:  XP_036452008 LinkDB All DBs Position Unknown AA seq 1593 aa AA seqDB search MGAGDHAWITGWGFGLQHSGTQPNCTLRVDQVEEGSHASLAGLRVDDEVVSVNGEPSSSL SLSEAIALIKGSTDGLQLVVKRCCFQGGFQTVSTTLRIPAPYRPQGPKELYISGSQDEAL YGETDSEAESPRRSPMVRTQFCIPAPKDRIGANTKGSGGGGTRLEITPGSVVELQLSLSK TTLGDTGCTSLGSALGVEGGFCHKKNDEDDDTTTSTPGCTLYIPLHERQPLSQRGVLISG PSALQGQVEVTTQPAGRSSGRERVGSGETEAKASERGDYGEGEGGRTEEAPTSSSVSFGI QSEEGDSESERELNEPNKHRPRHARLRRSESLSEKQVKEAKSKCKRIALLLTAAAPNPNN KGVLMFKKHRQRAKQYTLVSYGTGENEPEFEAEEDEEGNKETHAVEFTVLATSETELDED FFTNPPGHKSIVTFDWDTGLLEIERKLHKPEDMNALPETKGKGALMFAQRRQRMDEIVAE HEDMRSKGIPVESVQEDEKHYQQVEPRTYMPATESQNYMDVNVHQQQQYQQYQEQYYQQQ QQQQYQEYQQQLQYQQQQQHYQQQQEYQQQHYQQQQEYQQQQEYQQRHYQQQQEYEQQQQ YQQYQQQQQMQQYSHQMNGMSSQQTSVMQSSVMNRSAKPFSVQNTAAATFSQSASQEQPC YSVGQGEQIASRDERISVPAIKTGILQDNRRKNKAKPMFTFKETPKVSPNPELLNLLNRG DKKAGFESGPEEDYLSLGAEACNFLQSPKVKHKIPPPVAPKPHINPTSPPWSPQPEIASQ QFPQHAENNVPATAEAPGPEADPVPEMESSAIPKQEPSPTPAAELQEAPAHPLSQEHQEA VNAWGPSEQQMQPEQQENWNENQSQQHINNTQLVQPSPQVQAKSEPPVSSWGPSPTQAHQ QPPVSAWGPAEVQSQTLAQTQSHMQPAWVTQPQVQVQPSTSIQTQSQPQPPWVTQSPPQP QPHPQSQPQPQPQPQSQPQPQMNSWATAPAQSPPQPPWAQSQASAQPSVSTWPQDLNQTQ AQPPWVQQQQQHQESQPLPSWTTPQQHPQPPWAQPQGQPQPQPPWVTQTQQQALPQEPVN AWTQPQSPVQAQPPWTQQAQPPPQPSSQVQQSQGPWASMPTQSQPQPPWAQQPQEHPQQM MNSWAPEQSQVQPPWSQSQPPAQAPPPWVHQPQQEAPPPHSQQTVVSTWAPRPQQGPVST TAPAETQKLNQSAKPWSPPQTTQPPLQRMGSYTFGTKVPSPTPTSSTMSPSGMGSAFEMP ALRGKGAELFAKRQSRMEKYVVDSDTVQANKARPSSPSPSLPTTWKYSPNCRAPPPLAYN PLQSPSYPPGAIKQPPSSSPSIKSKNKGKETEKPAPKPLHVLDVMKHQPYQLNSSLFTYG PAAEKLAAEREAAEKLAAQKAAEAQAQAQAQAQAQAQAQAYVQVAGPPNQNGHLRYDQAP APYGFIPQQPQQPQQQYGMSGPPPAIHDGPYHHAPPNSYQPPPNAYQQVPYQQMYNPQPA YQQPPSNPYQQAPSPPYQQPPPYQTGPNPAYPAAPAPSYQQAQSSYVVPSFPVEARVDSA SGSSILTAPKPKFSAKKSAAQVWKPSAVESVEK NT seq 4782 nt NT seq  +upstreamnt  +downstreamnt atgggcgcgggggaccacgcgtggataacgggctggggctttgggctccagcacagcggc actcagcctaactgtaccctcagggtggatcaggtggaagaaggtagccatgcatcattg gctggtttgcgtgtggatgatgaggtagtgtccgtcaacggagagccatcttccagcctc agcctttcagaggctattgctctcatcaagggctccactgatggtctgcagctagtggtg aaaagatgctgttttcaggggggctttcagacagttagcaccactctgcggatcccagct ccatatagacctcagggtccaaaggaactctacatctctgggtcacaagatgaagcactc tatggggagacagatagtgaagctgaaagccctagacggagccctatggtccgaacccag ttttgcattccagctccaaaggacagaattggagcaaacaccaaaggctctgggggtgga ggaaccaggttagaaatcactccaggatctgtggtagagttacagctgtcgctgtctaag accaccctgggggacacaggctgtacctcactgggcagcgctcttggagttgaaggaggc ttctgccacaagaaaaacgatgaagatgatgacactaccaccagcacaccaggctgtacc ttgtacatccccctccatgagagacagcctttgagtcagcgaggggtgctcatcagtggt ccatctgctttgcagggacaggtggaggtgaccacacagccagcagggaggagctctgga agggaaagggtgggatctggtgagactgaagcaaaggccagtgaacgaggggattatggt gagggagaaggagggcgcactgaggaagcccccacctcctcctctgtctcctttggaatt caatcagaagagggggactctgagtcggagagggagctcaacgagcctaacaagcaccgg ccgaggcacgccaggctccggcgtagcgagagcctgtctgaaaagcaggtgaaggaggcc aagtctaaatgcaagcgcattgctctactcctcactgctgctgcccccaaccccaataac aagggggtattgatgttcaagaagcatagacagagggccaagcagtacacacttgtaagc tacggaaccggagagaacgaaccagagtttgaggccgaggaggacgaagaaggcaacaag gaaacacatgctgttgagttcacagttctagccaccagtgaaactgaacttgatgaggat tttttcacaaatcccccaggccacaagagcattgtgacttttgactgggacactggactg cttgagatagagcgcaaacttcacaaaccagaagacatgaatgcgctccctgaaaccaag ggcaaaggagccctgatgtttgctcagcgcaggcagcgtatggatgagattgtggctgag catgaagacatgagaagtaaggggatccctgtcgaatcggtacaggaggacgagaagcat taccaacaggtggaaccacgcacttacatgccagcgactgagagtcagaattatatggat gtcaatgtgcaccagcaacaacagtaccagcaataccaagaacaatattatcagcagcaa cagcagcaacaatatcaagaatatcagcagcagttacagtaccagcaacagcaacagcat taccagcagcagcaagagtaccaacaacagcattaccagcaacagcaagagtaccagcaa cagcaagagtaccagcaacggcattaccagcaacagcaagaatacgaacaacagcaacag tatcaacagtaccaacaacagcagcagatgcaacagtattcacatcaaatgaatggtatg tccagtcaacaaaccagtgtaatgcagtcatcagtaatgaatagaagtgccaagccattc tctgttcagaatacggcagcagccacattttcacaatcagcaagtcaagagcagccttgc tattcagttggacagggtgaacaaattgcttcccgagatgagcgaatatccgtacccgca atcaagacagggatcttgcaagataacagaaggaagaacaaagctaagccaatgttcact tttaaagagactcccaaagtttccccgaatccagagctgctaaatctccttaacaggggt gacaagaaggctggttttgagtcaggcccagaggaagattacttaagtttgggggcagaa gcctgcaacttcttgcagtctcctaaagtaaagcacaaaatcccaccacccgttgctccc aagccacacataaacccaacctctccaccatggtctccacaaccagaaatcgcaagccag cagttccctcagcatgctgaaaataacgtcccagcaactgctgaggctcctgggcctgaa gccgaccctgtccctgaaatggagtcctcagccataccaaagcaagaaccctcccccaca cctgctgctgaattacaggaagctcctgctcaccccctctcacaggaacatcaagaagca gtcaatgcatggggtccatctgagcaacaaatgcaaccagaacaacaagaaaattggaat gagaatcaatcccagcagcacataaataacactcagcttgtccaaccgtcacctcaagta caagcaaagtcagagccacctgtcagctcttggggtccatctccaactcaggctcatcag cagccaccagtgagtgcttggggtccagctgaggttcagtcacaaacccttgcacagact caatcacacatgcagcctgcttgggtaacacaaccccaagtccaagtgcaaccatctaca tctattcaaactcagtcacagccccagcctccttgggtgacacaaagtccaccccaacca caacctcacccacagtctcagccccaacctcaaccccaacctcaatcccaaccccaacca caaatgaattcatgggcaacagctccagctcagtcaccaccccaacccccatgggcacaa tctcaagcatcagcacagccatctgtcagtacctggcctcaagatctaaatcagacccaa gctcagccaccctgggtgcaacaacaacaacaacatcaggaatctcaaccattaccatct tggacaacccctcaacagcatccccagcctccttgggcccaacctcagggccagccacag ccccaaccaccttgggtcactcagacccaacagcaagcgctgccacaggaacctgtaaat gcatggacccaacctcagagtccagttcaagcacagcctccatggactcagcaggctcaa ccaccaccacagccttcatcacaggtacaacaatcccagggtccttgggcctcaatgcct acccagtcacaaccacaaccaccatgggctcaacaacctcaagagcatccacagcaaatg atgaactcatgggcaccagagcagagtcaagtacagccaccctggagtcagtcacagcct ccagctcaggcaccacctccatgggtccatcaacctcagcaagaggcaccaccaccgcat tctcaacaaacagttgtaagtacatgggcaccacggccccagcaaggtccagttagtacc acagcgcctgctgaaactcagaagctgaatcagtcagccaaaccatggagtccacctcag accactcagccccctctacagcgaatgggctcatacacatttggaacaaaggtcccatca cccactccgacaagtagtacaatgtctccctctggaatgggatcagctttcgagatgcca gccttgcgagggaaaggagctgaactttttgctaagaggcaatccagaatggaaaagtat gtggtggattctgacacagtgcaggcaaacaaggcaagaccttcttcaccttcaccttct ttgccaaccacatggaaatattcacctaattgtcgtgctcccccaccattagcgtacaat ccacttcagtcaccctcatatccaccaggtgctatcaaacagcctccatcttctagtcct tctataaagagtaaaaataagggcaaagaaacagagaaacctgcccccaaaccccttcat gttctggatgtcatgaagcatcaaccctaccaattaaattcctctctttttacatacggg ccagcagcagagaaacttgctgcagaaagggaggcagctgaaaagcttgctgctcagaaa gcagcagaagcccaagctcaagctcaagctcaagctcaagctcaagctcaggctcaggct tatgtccaagttgctggtcctccaaaccaaaatgggcatttgagatatgatcaagctcct gccccctatggttttattccacagcagccccagcaaccccaacagcaatatgggatgtct ggtcccccacctgctatacatgatggcccttatcaccatgctcctcctaacagctaccag cctccccctaatgcttatcaacaagttccctatcaacaaatgtataacccccagcctgct taccagcaacctccttcaaatccttaccagcaagccccaagtcctccttaccagcagccc cctccatatcaaaccggccctaacccagcctatccagctgccccagcaccaagctatcaa caagcccaaagctcctatgtggtaccttcttttcctgtcgaagcaagagtagattctgcc tcaggaagtagcattcttactgctccaaaaccaaagttctcagccaaaaaaagtgccgca caggtttggaagcctagtgctgttgaaagtgttgaaaagtag

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