Colossoma macropomum (tambaqui): 118825508
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Entry
118825508 CDS
T09004
Symbol
puf60b
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-B isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118825508 (puf60b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118825508 (puf60b)
Spliceosome [BR:
cmao03041
]
Complex A
U2 snRNP components
U2 related factors
118825508 (puf60b)
Complex B
118825508 (puf60b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
118825508
NCBI-ProteinID:
XP_036452036
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MMENGQGMGSKLALPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAA
VTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW
DSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEA
RAYNRIYVSSVHPDLSDDDIKSVFEAFGKIKSCMLAREPTTGKHKGYCFIEYEKPQSAID
AVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAATAKITAQEALVSP
AQILSQQIGLPQAVLAAQAPGLITGVTPVRPTLPVVPQVGLVNPVLASPPVTSTTSTGTP
TATTLQLPAETKKEVEEKQREENAARADGLGPERASEHEQLGSSGGRHAVAQSGSTVMVL
RNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQERQGEEEDAEIIVKIFVEFSDTEEMN
KAIQALNNRWFAGRKVVAEVYDQERFNNSDLSA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaatggtcaaggcatgggctccaagctggccctgccgcccctcactccggag
cagcaggaggcactgcagagggcaaagaaatatgccatggagcagagcattaagagtgtc
ctggtcaaacagacaatagcccaccaacagcagcagcttacgaacctgcagatggcagca
gtgactatgggctttggagatcctctctcacctttacaatcggtggcagcacagaggcag
cgagctctggcaatcatgtgtcgggtctatgtgggttccatctattacgagcttggcgag
gacaccattcggcaggcctttgccccgttcggtcccatcaagagcatcgacatgtcctgg
gactctgtcaccatgaaacacaagggctttgcttttgtggagtacgaggtgcctgaggcg
gctcaactggccctggagcaaatgaattcagtcatgctgggtgggaggaacataaaggtg
gggcggccaagtaacatcggacaggcgcagcccatcattgaccaactggcagaggaggcg
cgcgcctacaaccgaatttatgtatcctcggtgcatccggacctgtctgacgatgacatc
aagagcgtctttgaggccttcggcaagataaaaagctgcatgctggcccgggagcccacc
acagggaagcacaagggctactgcttcattgaatatgaaaagcctcagtcagccatagat
gcagtgtcctccatgaacctgtttgaccttggaggtcagtacctgagggtggggaaggct
gtaacccctccaatgcccctgttgacccccacaacacctggtggtttgccccctgctgca
gctgttgcagctgctgctgccactgctaagatcacagctcaggaggcgttggtatcccca
gcccaaatcctcagccagcaaattgggcttcctcaggctgtgctggcggcccaggccccg
ggcttaattacaggtgtaacacctgttcgaccgaccctccctgtggtcccacaggttggc
ctggttaacccggtgctggcatcgcctcctgttacatccaccacatctacaggaacacct
acagccaccacgctgcagctgcctgccgagaccaagaaagaagtagaagaaaagcagcga
gaggaaaacgcagcccgggcagacggtctaggaccagagcgtgcgagtgagcatgagcaa
ctcggcagcagcggaggcagacacgcagtcgcgcaatcagggtccacagtaatggtgttg
cgcaacatggtggggcctgaggacatcgatgatgacctggagggggaagtgacggaggaa
tgcgggaaatttggtgctgtgaaccgggtcatcatctaccaggaacgccagggagaggag
gaggatgccgagatcattgtgaagatctttgtggagttctccgacaccgaagaaatgaac
aaggccatccaggcccttaacaacaggtggttcgcaggtcgcaaggttgttgccgaggtc
tacgatcaggagcggttcaataatagcgacctgtccgcataa
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