Colossoma macropomum (tambaqui): 118825534
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Entry
118825534 CDS
T09004
Symbol
col14a1a
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cmao00535
]
118825534 (col14a1a)
Proteoglycans [BR:
cmao00535
]
Extracellular matrix (ECM) proteoglycans
Others
118825534 (col14a1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Fn3_PBP1
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
Fn3_Dep-1_2nd
VWA_3
Motif
Other DBs
NCBI-GeneID:
118825534
NCBI-ProteinID:
XP_036452085
LinkDB
All DBs
Position
Unknown
AA seq
1903 aa
AA seq
DB search
MQVFGLRMKSWRTLVFLAVLLQFLGPTEGQIPAPRRLRFRVLGPSELHVSWKEPKGEIDG
YRFIYSVPGGERNELRIGKGENKAIINDFNPTKVYSVKVIAVSGNQQSRALQGNYAVESW
EFDGEDTQPQRLKDPSPPEEGTETSEAAEQFVCTTPAVADIVVLVDGSWSIGRLNFRLVR
TFLENLVNAFDVGITKVRIGLAQYSGDPRIEWHLNAFTTKDAVIDAVKNLPYKGGNTLTG
LALTYVLKNSFKPESGSRSNVPKIGILITDGKSQDAVDVPAQSLRDAGVELFAVGVKNAD
ENELKVIASDPDHTHVYNVADFSIMNTIVEGLTRTVCHGVEQQDKEIKNLVPEETEGAPE
NLQTSEVTARSFRVSWTAAPGRVEKYRVVYYPSKGGQPEEVVVDGSENSAVLENLNSLTE
YEIAVFAVYSASASEGLRGSETTLALPMVGGLELYDVTHSSMRARWRAADGASGYMVLYA
PLSSETLDETEVKVGETVTDLELVGLSPDTEYTVTVYAMFGEEASNPATAQDTTLSLKPP
RNLRVTELDHSSVRLNWDAPSERVKGYRVMYVKTDGVQSNEVEVGPVTSVYLKKLDSVTE
YTVAVFAVYDEGQSEPLNGGFSTKHVPAPLTLRISEVTAESFRVSWTRPADGVVLYKLVW
SPFGEVDSKEVLVPGDVESYVVNNLFSLTDYEVLLSAIYSDKSESDAVAGLQTTLGSITT
TAVTTTAVSRLGVINLQVDDETTHSLQVSWELQDLDVNDFRVTYISLRGDRAEEMVLVPG
NKRTVLLQPLLSDSQYKITVSPVYPDGEDSMLSMSSMGRTLPLSAPTNLRVSEEWYNRFR
LTWDTPASTTLGYRIIYQPSSGSGHALETFVGEDVNTLMIMNLQPGTEYSVKVIASYTTG
SSQPLTTTANTLFLGVSRLSTYQIHTDSLCVQWQPVQQASLYRIIVRSPHNDQSQELSVS
GGASRQCFYNLTPNTQYNISVHTQTQDTEGPAVTITATTLPAPTQPPTAPPPTVPPAKEV
CKAAKADLVFLVDGSWSIGDDNFQKIIRFLYSTTGALDLIGPEGTQVAIVQFSDDARTEF
KLNSYGDKESLLDAVQRITYKGGNTKTGRAIKHVKDSIFTPEAGMRRGIPRVLVVLTDGR
SQDDVNKISKEMQVDGYIIFAIGFADADYGELVNIASKPSERHVFFVDDVDAVKKIEEQL
ITFVCEAATATCPSVLMSGNTLAGFRMMEMFGLVEKHYSNVQGVSMEPGTFNSFPCYRLH
KDALLSQPTRFLHPEGLPSDYTVSVLFRILPETPQEPFALWEILNKDNEPLVGIILDNGG
KTLTFFNYDYKGDFQTVTFEGPEIGKIFYGSFHKVHVAISKTTAKVVIDCKMVGEKPISA
AGNITIDGTEVLGRMVRSRGKRDNSAPFQLQMFDIVCSTSWAARDKCCELPGLRVEQDCP
SLPHACTCSQDSKGPPGPSGPPGGPGIRGSRGDRGEPGSVGPQGPTGEIGPPGLQGPPGP
QGPSGHSIQGPPGAPGERGEKGDAGLPGPQGVPGAGGSPGRDGSPGQRGLPGKDGPQGQV
GPPGPMGSPGAPGAPGSSGPPGPQGDQGPPGPAGNKGDRGERGDMQSQAVVRSIARQVCE
QLIQSHLSRFNSILNQIPSQSVSFRTVPGPPGEPGRPGPRGPQGEQGPPGRPGFPGANGL
SGRPGERGLPGEKGEKGTPGVGQQGSRGPPGPPGPPGEGRTGSQGPPGRPGTQGTPGRPG
TPGSTGPPGPPGYCDQNSCLGYNIGVQPLPPSPYQNYGPGDSTAQEEEEEEEDPYAGYRG
YPPQYYQPNYHDSQMAQDSHAYPGYPGYPGYPGYPWLPRCRASLFPQPERKKTSSAHNRR
GGGDYTLIMHQYTHSDINTRAAQYKQLHKAILNLFQCVLKVTV
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtttttgggttgagaatgaagtcgtggaggacgctggtcttcttggcagtgctg
ctgcagttcctcggccctaccgagggccaaattccggctccacggaggctgcgcttcaga
gtcttgggtccgagcgagttacacgtttcctggaaggagccgaaaggagaaatagacggc
tatagatttatttacagtgttccaggcggggagaggaacgagctacgaatcgggaagggt
gagaacaaggcgataataaatgacttcaatcccacgaaggtgtactcagtcaaggttata
gctgtgagtggaaaccagcaaagcagagctctgcaaggaaactacgcagtggagagctgg
gagtttgacggagaggacacacagccgcagagactgaaagacccctcgcccccggaggag
ggcactgagacttcagaggcggcggaacagttcgtgtgtacgaccccggcagtggcggac
attgtggtcctggtcgacggctcctggagtatcggaaggttaaacttccgtctggtgcgc
acattcctggaaaacctggtcaatgcctttgatgttggaattactaaagtccgtatagga
ttggctcagtacagtggggatcccaggattgagtggcatctgaacgccttcactactaaa
gacgccgtgattgatgctgtcaagaacctgccatataaaggagggaacacactcacaggt
ctggcccttacatacgttctgaagaacagctttaaaccagaatctgggtctcgaagcaat
gttcccaaaatcggaatcctgatcactgatggaaaatcccaggatgcggttgatgttcct
gcacagagcctgagggatgctggggtggaactgtttgccgtcggggtgaagaacgctgat
gaaaacgagttgaaggtcattgcctctgatcctgatcacacacacgtctacaatgtggct
gatttcagcatcatgaacacaatcgtggaaggtctgactcgaactgtgtgtcacggagta
gagcaacaagacaaagagatcaaaaatctggttcctgaggagacagagggcgctcctgag
aacctgcagacttctgaggtaacagcccgaagtttccgtgtgtcctggaccgccgctccg
ggccgggtggagaaataccgcgtggtttattatccatccaaaggaggccaaccagaggag
gtggtggtggacggttcggagaattcggccgttctggagaatctaaattctttgactgag
tatgagatcgccgtgtttgctgtttactcagcctccgccagcgaggggctccggggcagc
gagaccaccttggccctgccaatggttggtggtctggagctatatgatgttacccatagt
tccatgcgtgctcgttggagggctgcagatggggcttctgggtacatggtgctgtacgct
cctctgagcagtgagaccctcgacgagacggaggttaaagtaggcgagactgtgacagac
ctggagctggtgggtttgagtcctgatacagaatatacagttacggtgtacgccatgttc
ggagaggaggccagcaaccctgctacagcgcaggacaccaccttgtctctgaagccgcct
cggaatctgcgtgtcactgagcttgaccacagctctgtccggctcaactgggacgcgccc
tcagagagggtcaaaggttaccgtgtgatgtatgtcaagaccgatggggtccagagtaat
gaggtggaggtggggccggtcactagcgtctacctgaagaagctggactctgtgacagaa
tacaccgtggccgtgttcgctgtctacgatgagggccagtcggaacctcttaacggaggc
ttcagcaccaagcacgttccggccccgctgaccctcaggatcagtgaagtgacggcggag
agtttccgggtgagctggacgcggcctgcggacggagtggtgctctataaactggtctgg
agccccttcggagaggtggacagtaaagaggtgttggtgccgggtgatgtggagtcatac
gtggtgaataatctcttttctctgacggactatgaagttctgctgtctgcgatctacagc
gacaagtctgagagcgatgctgtggctggactacaaaccacactgggcagcatcaccacc
actgccgtcaccaccacagcagtgtccagactcggagtaattaacctgcaggtggacgat
gagaccactcacagtctgcaggtgagctgggagcttcaggatttggatgtaaatgatttc
agagtgacgtacatcagcctgagaggagaccgagcagaggaaatggtgctggttccgggt
aacaagaggaccgtcctgctgcagcctcttctctcagactcgcagtacaaaatcactgtc
agccctgtttatccagacggggaggacagcatgctctccatgtcctctatggggcgaaca
ttaccgctgtcggcccccaccaacctgcgggtctctgaggaatggtacaaccgcttccgc
ctcacctgggacacacctgcctccaccaccctgggctacaggatcatctaccagcccagc
tcagggtcaggacatgctctggagacgtttgttggtgaagatgtgaacactctgatgatc
atgaacctgcaacctggaacagaatacagcgttaaagtcatcgcttcctacaccaccggc
tccagccaaccgctcaccaccaccgccaacacactgtttctgggagtgagcagactcagc
acgtatcagattcacaccgacagcctgtgtgtccagtggcagcccgttcagcaggcctca
ctctacaggatcatcgtccggtccccacacaatgatcagagccaggagctgagcgtgagc
ggcggagcgtcccgacagtgcttctacaacctgacccccaacacacagtacaacatcagc
gtccacactcagacacaggacacggagggacctgcggtcaccatcaccgccacaacactt
ccagctccgacccaaccaccaactgcaccgcctcccaccgtcccaccggccaaagaagtc
tgtaaggcagctaaagcagacctggtgttccttgtggacggatcctggagtatcggagat
gacaacttccagaagattattcgttttctctacagcaccactggcgcactggacctcatt
ggccctgaaggaacacaggtggctatagttcagttcagtgatgacgctcgtacggagttt
aagctgaactcttacggtgataaagagtcgctcctggacgcagtccagcgaatcacctac
aaaggaggaaacaccaaaacaggccgagccattaaacacgtgaaggacagcatctttact
ccggaggccgggatgaggagagggattccccgagttctggtggtgctgacggacggtcgc
tcgcaggacgacgtcaacaagatctccaaggagatgcaggtggatggctacatcatcttc
gccatcggtttcgccgacgctgattacggtgagctggtgaacatcgccagcaaacccagc
gagagacacgtgttcttcgtggatgatgtggacgctgtgaagaagatcgaggagcagctc
ataacgttcgtgtgtgaagcagcgacagccacgtgtccctctgtgctgatgagcgggaac
accttggcaggtttccggatgatggagatgtttggtctggtggagaaacattacagtaac
gttcagggagtttcgatggagcctggaaccttcaacagcttcccctgttacagactgcat
aaagatgccctcctctcacagcccaccaggtttctgcaccctgagggtctcccctccgac
tacaccgtctcagtgctcttccgcatcctgcctgaaacccctcaggagccctttgcactg
tgggaaattcttaacaaagacaacgaacccctggtgggcatcatcctggacaatggagga
aaaactctgaccttctttaactacgactataagggtgatttccagacagtgacgttcgag
ggacctgagattgggaagattttctatggcagtttccacaaggtccacgtggcgatcagt
aagactacagcgaaggtggtgattgactgtaagatggtgggggagaagcccatcagcgct
gcagggaacataaccatagatggaacagaggttctgggccgcatggtgcgctctcgcggg
aagagggacaactcggctccgttccagctgcagatgtttgatattgtgtgcagcacctcg
tgggccgctcgggataaatgctgcgagctcccaggcctgcgagtagagcaggactgtccc
tctctgccgcacgcctgcacctgctctcaggacagtaaaggaccaccgggaccctccgga
cctccaggtggtcctggtatacgaggctctcgaggtgaccgtggagagccgggctcagtg
ggacctcaaggacctactggagagattggacctcctggactgcagggacccccaggacca
cagggcccgagtgggcactccatccagggaccaccgggagctccgggagagagaggagag
aagggtgacgcaggtcttccaggtcctcagggtgtaccgggagccggtggatcaccgggc
agagacggctctccgggtcagaggggtttgccaggtaaagatggaccgcaggggcaggtc
ggcccaccaggaccaatgggcagcccaggagcccccggagctcccggatccagcggaccc
ccgggaccacaaggagatcaaggaccacctggtcctgcgggcaataagggcgatcgagga
gagcggggggatatgcagtctcaggcggtggtccgatctatagcccgacaagtgtgtgaa
cagctaattcagagtcacctctcccgcttcaactccatcctgaaccagatccccagtcag
tctgtgtcgttccgtacggtaccgggtcctcctggagaaccgggccgaccaggaccccgg
gggccgcagggagagcagggtcctccgggtagaccgggcttccccggagctaacgggctc
agtgggcgtccaggagagagagggctcccaggagagaaaggagagaagggaactcctggt
gtgggacaacaaggctcccgtggccccccaggacccccaggtcctcctggagagggccgg
accggaagccaaggccctccaggccggcctgggactcagggcactccaggacgccctgga
acccccggcagcaccggaccccctggaccccctggctattgcgaccagaactcctgttta
ggctacaacatcggagtacaaccgttacctcccagcccctaccaaaactacggccccggc
gacagcaccgcccaggaggaggaggaggaggaggaggacccgtacgccggttaccgtgga
tacccaccccagtactaccagcccaactatcatgactctcagatggcccaggacagtcac
gcctaccctggttaccccggttaccctggataccccggatatccctggttaccccggtgc
cgggcatcgcttttcccgcagcctgagcgaaaaaaaacaagctccgcccacaacagaaga
ggaggcggagactacacactgataatgcaccaatacacacactcagatataaacacaagg
gctgcacaatataaacaactgcacaaagctattctaaatttgttccaatgtgttctcaaa
gtcacagtttaa
DBGET
integrated database retrieval system
