Colossoma macropomum (tambaqui): 118825567
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Entry
118825567 CDS
T09004
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118825567
Membrane trafficking [BR:
cmao04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
118825567
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
TPR_8
TPR_7
ARM_TT21_4th
SH3_1
TPR_NPHP3
SNAP
SH3_9
TPR_10
TPR_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
118825567
NCBI-ProteinID:
XP_036452126
LinkDB
All DBs
Position
Unknown
AA seq
1319 aa
AA seq
DB search
MSTADESNTVSTVDSELSTECSSNDSGVNKDTSKIMDTENKPSRGIESFKWSSAASEDIV
PTVLALQLAVAEGPDRLPADKNTQEVLCGKLRVLEADLTKITTLIAEFSAHLVSISSEER
TIFITFKTFEEIWKFTTYNKMGFLRQSLENLLLDQEFWLNTLDHEDSGIEVSIKEENLNL
MYKGFLMQEGSFFGSCTVNQMFDSSTSGSDLYLEKGDIALFEPPFLGSGWTVLSLADGSR
GTKPKPALEPVIPFHEWFLKSCPESVLVGSGKACCDLPFQIAVGSCEAVEAYDGNGPDEL
SFEAGDHIIILGLLVNCFEWFMGKLERTGDTGLVKTSLVKATDSLCESDEIFLKEEDRKI
FNLEQEKIKEETIAFLKKTCQSDVATVYRLDLVKPESVQNGPIADNADRIEVYIDLKRKI
TPLLREMKDPNRDEIALDSSELQTDSESTETESPQEIPHFTVCSEKDGTSPDGHHSLLSF
LGSCDHQPEFQLLYSAYPEFLLLHFEGHSDEEELVAYLGAARETARKKRMSWAQSRICFL
LGQLCAGRSKFSQARVYYEEALSVPRDYFSDMPLLSALYSNLALIYLTQKNMEKYFTLSE
RFAALLMAVCDCLSGSEEPEVLKFALKKAILSQNKPAEARLCLLLAKLHLKLGEGMSAVP
FIERLLILADEMPGVCNTICSHGFLLLARLYNDHHLPHLADSSARHACLQVSSAVADCLC
SISLLLENAQELYGIDIPTQVAPCLTRAAALAYNGMEPSLAHAHALCLSWLYQKHGMPNR
AVHYMCSLLEHTSASSLSQQDTSAALIWLAWLLICGLQHRAALDVLDAVLSTLPEHCTTQ
LEGVVYNMRAIALRHAGNVKQAAESFQAAAEVCEEFEDRHNWAVALANFGFLCLQVKAKR
LAEEHLAQAVELFSELEDEGHELSFVAVLLELGKLFVSQGFCEKGKICYEWALLTAILYD
NSESQLQATRRLCHLYGEVCPDEAQCIIYNEHQLNLLHQTGDITLEGEILEKISQLYLSL
GTEKANRTALDYTKRSLGIFIDLGKKRKEAHGWLQAGKIYHILKQSELVELYVQVAQDIA
LSTGDTAFILELLEASGDVFFNSTHDREKAVCFYRDRALPIAVKSGSVPSQLRLCNKLTE
LLLQLGQYGEALEYAQTALDISITLADRLNERVAFHRLATLYHCLSQFEMAEHHYLKALS
LCPSPLQFDEEALYYVRVYQTLGDIIFYDLKDPYDAAGYYHLALAAAMDLGNKKSQLELC
TRLATIYHNFLMDRELSLHFYQRARAFAADLNIRRINLAPDQSFRTTAQYKITASQATR
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgctgatgaaagcaacacggtgagcacagtggactccgagctttcgaccgag
tgctcaagcaatgattcgggggtgaataaagacacctccaaaatcatggacacggaaaat
aaaccatcgagaggaatagagagtttcaaatggagctcagcagcttctgaagacattgtt
cccacagtgttggccctccagctggctgtggcagaaggaccggaccggcttcctgctgac
aagaacacacaggaagtcctctgcgggaaactgcgtgtgctggaggctgacctcacaaaa
atcacgaccctgattgctgaattctcagctcatttggtgtccatcagcagtgaggaaagg
actatatttatcacttttaaaacatttgaagaaatatggaagttcaccacctataacaaa
atgggtttcctgcgtcagtctttggagaatcttctgttggaccaggagttctggttgaac
actttagaccatgaagactcagggattgaggtgtcaattaaagaggagaaccttaactta
atgtacaaaggctttctaatgcaagaaggttcattttttggaagctgtacggttaatcag
atgtttgatagctcaacatctggcagtgacctttacctggagaagggggacattgctctt
tttgagcctccattcctaggctcagggtggacagtgttgtccttggcagatggatcaaga
ggaactaaacctaagccagccctggaaccagtcattccttttcatgagtggtttcttaag
tcctgtcctgagagtgttttggttggcagtggaaaggcatgctgtgatcttccatttcaa
attgctgtaggttcctgtgaggcagtcgaagcatatgatggtaatggaccagatgagctg
agttttgaggctggagatcacatcatcatcctgggcctactagtaaactgctttgagtgg
ttcatgggcaagttggagaggactggtgatacgggactcgtcaagacaagcctggtgaaa
gcaactgattctctttgtgaatcagatgagatctttttgaaagaagaggacagaaaaatc
tttaacttggaacaagagaagattaaggaggaaaccattgcctttttgaagaaaacatgc
caaagtgatgttgctacagtctacagacttgatttggtaaagccagaatcagttcaaaac
ggtcccattgcagacaatgcagatcgcattgaagtgtatatagacctgaaaaggaaaatc
acccctcttttgagagagatgaaggatccaaacagagatgagattgcactggacagttct
gagcttcagacagattcagagtccacagagacagagtcaccgcaggaaatcccacatttc
actgtgtgttcagagaaggatggtaccagcccagatggacaccactccctcctctccttc
ctaggcagctgtgaccatcagccagagtttcagctgctctacagcgcctacccagaattc
ctcctgttacactttgagggtcattctgatgaagaggagctggtggcctatctaggtgca
gctcgagaaacagcaagaaagaagcggatgtcatgggcacagagcagaatctgcttccta
cttggacaactgtgtgcaggcaggtcaaagttctctcaggctcgagtctattacgaagaa
gccttaagtgtaccccgagactatttctcagacatgccccttctctctgccctctattcc
aacctggccctcatctatctcacacagaagaacatggagaagtatttcactctgtctgaa
cgctttgctgctttattgatggcagtctgtgactgcttatctggctcagaagaacctgag
gtgttaaaatttgcattgaaaaaggcaattttgtctcagaacaagcctgcagaggcccgg
ctctgcctcctcttagccaagctccatctgaagctcggagagggcatgagcgcagtgcct
ttcattgagcggctgctgatcttggctgatgagatgccaggagtctgcaacacaatatgt
agccatggttttttactcttagccaggctttataatgatcatcatcttcctcacctggct
gacagctcagcaaggcatgcatgtcttcaggtgtcttctgcagtcgctgactgtctttgc
agcatctctcttctgttggagaacgctcaagagttgtatggaatcgacatcccaacacaa
gtggctccatgtttgacacgagctgctgctttagcatacaatggcatggaacctagcctg
gctcatgcccatgccctttgtctgtcttggctttatcagaagcatggcatgcctaacaga
gcagttcactacatgtgcagcctcctcgagcatacgtccgcttccagcctcagccaacaa
gacaccagtgctgccctcatatggctggcctggctgcttatctgtggcctgcagcaccgt
gctgccctggatgtgctggatgcagttctgtccactctccctgagcactgcaccacacag
ctggagggggtggtttacaacatgcgtgccatcgctctgaggcacgccggcaatgtcaaa
caggctgcagagagtttccaggctgcagctgaggtctgcgaggagtttgaagacaggcac
aactgggctgtagccctggccaactttggcttcttatgtttgcaggtcaaagctaagagg
ctagctgaggagcacctcgcccaggctgtagagctgttctctgagctagaggacgaaggc
catgagctgagctttgtggctgtgcttctggagctgggcaagctgtttgtgtcgcagggt
ttctgtgagaaagggaaaatctgttatgagtgggccctgctgactgccatcctgtatgat
aactcagagagccagctgcaagccacccgtcgcctgtgtcacctgtatggtgaagtttgc
cctgatgaagcgcagtgtatcatctataatgagcaccagctgaacctgctgcaccagaca
ggagacataactctagaaggagagatactggagaaaatcagccagctgtatctgagtctg
ggcacagagaaagcaaatagaacagcactggactacactaaaagaagtctagggatcttt
attgatctgggaaagaagaggaaggaggcccatggctggctacaggcaggaaaaatctac
cacatccttaaacagagtgagctggtggagctttatgtgcaggtagcacaggacattgct
ttgagcacaggagatacagccttcatcctggagctcctggaggcatcaggggacgtgttc
ttcaacagcacacatgacagagaaaaagcggtctgcttctacagggaccgagctctccct
atagcggtgaagtcgggcagtgtgccttctcagctcaggctgtgtaataagctgactgag
ttgctgctacagctgggacagtatggggaggctctggagtatgcacaaactgcattagac
atcagcatcactctggctgatcgtttaaacgagcgagtggcgtttcatcggctggctacg
ctgtaccactgcctgagtcagtttgagatggcagagcaccactacctgaaggccctttct
ctgtgtccctcccccctgcagtttgatgaagaagccctatattacgtcagggtgtatcag
acactaggggacattatcttctatgatctgaaggatccatatgatgcagcaggttactac
cacctagccctggcagctgccatggacctgggtaataagaagtcccagctagagctgtgc
actcgcctggccactatatatcacaacttcctgatggaccgtgagctgtccctgcacttc
taccagcgcgcacgggcctttgctgctgacctcaatatccgtcgcatcaacctggcacca
gatcagagcttccgcactacagctcagtacaaaatcacagcctcacaggctacaagatag
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integrated database retrieval system
