Colossoma macropomum (tambaqui): 118825572
Help
Entry
118825572 CDS
T09004
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118825572 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118825572 (dhx15)
03009 Ribosome biogenesis [BR:
cmao03009
]
118825572 (dhx15)
Enzymes [BR:
cmao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118825572 (dhx15)
Spliceosome [BR:
cmao03041
]
Complex A
U2 snRNP components
U2 related factors
118825572 (dhx15)
Complex B
118825572 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
118825572 (dhx15)
Ribosome biogenesis [BR:
cmao03009
]
Eukaryotic type
90S particles
Helicases
118825572 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Atrophin-1
nSTAND3
Flavi_DEAD
DUF3915
AAA_29
AAA_25
AAA_7
Motif
Other DBs
NCBI-GeneID:
118825572
NCBI-ProteinID:
XP_036452134
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSSDGKDRDRDRDDRSKDRDRDRDRDRDRERDRDRESKAPSM
TLNSSLAAGGGMLPLKQAAVHQQINPFTNLPHTQRYYEILKKRLQLPVWEYKERFNEILT
RNQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDV
MLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDI
LMGVLKEVVRQRADLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDY
LEAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYST
LPPQQQQRIFEPPPPRKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRI
RVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV
LQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQL
AKMVIASCDFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVY
HAFKQNHESVQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRR
ALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCT
DIKPEWLVKIAPQYYEMSNFPQCEAKRQLERIIAKLQTKEYSQY
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgacatcgcttggatttaggcgatgattactcatcgagcaaaaagagatct
tctgacggaaaagatcgtgatagagatcgtgatgaccggtcgaaggaccgcgatcgtgac
agagatcgggaccgggatcgagagagggacagagacagggaaagcaaggcccccagcatg
actctgaactcgagcctagcggccggaggaggcatgcttcccctcaagcaggcggctgtt
catcagcagatcaacccctttaccaacctgccgcacacacagcgctactacgagatcctt
aagaaacgccttcagctgcctgtctgggagtacaaagagcgcttcaatgagatcctcacc
cgcaaccagagctttgtgctggtgggagagactgggtctgggaagaccacacagatccct
cagtggtgtgtggacatggtccggtctttgccggggcctaagcggggtgtagcctgtact
cagcccagaagagtggcagccatgagcgtggctcagagagtggcggatgagatggacgtc
atgctgggacaagaagtcggttactccatcagatttgaggactgtagctcagcaaaaacc
atccttaagtacatgaccgacggtatgttgctccgtgaggccatgaacgaccccctcctt
gagcgatacggcgttattatcctggacgaggctcatgagcgcacactggccacagatatt
ctgatgggtgtcctcaaagaggttgttcgccaaagggcggacctaaaggttattgtcatg
agtgccaccctggatgctggaaagttccaggtgtatttcgacaactgccccctgctcact
attcctggcagaacacatcctgtggaaatcttctacacaccagagccagagcgagactac
ctggaggcagccatcagaacggttatccagatccacatgtgtgaggaagacgagggtgat
gttctgcttttcctcacaggacaggaggaaatcgacgaagcttgcaagcgtatcaaacgg
gaaattgatgacctgggcccggaggtaggagacatcaaaatcatcccactctactccaca
ctcccgccccaacagcagcagaggatcttcgagcctcctccgcctcgcaagcccagcgga
gccatcggcaggaaggtcgtggtgtccacaaacatcgctgagacgtccctgaccatcgac
ggcgtggtgtttgtaattgatcctggctttgccaagcaaaaggtgtataacccccgaatc
agggtggagtcactgctagtgacggctatcagcaaagcgtcggcccagcagagggcgggg
cgagctggacgtacacgtccagggaagtgcttccgactctacacggagaaggcttacaag
actgagatgcaggataacacgtacccagagattctcaggtcaaacttgggctctgtggtg
ttacagctgaagaaactaggtattgatgacctggtgcactttgacttcatggacccacca
gctcctgagaccctgatgcgtgctctggagctgctgaactaccttgcggcactgaacgat
gacggagacctgacagagctgggctctatgatggccgagttccctttggaccctcagctg
gctaaaatggtcattgccagctgcgacttcaactgctccaatgagatcctctcaatcaca
gccatgctatcagtcccacagtgcttcgtgcgcccaactgaggctaagaaggcagctgat
gagtcgaagatgaggttcgcccacatcgacggggaccacctgaccctgctgaatgtctac
catgccttcaaacagaaccatgagtcagtgcagtggtgctatgacaactttgtgaactac
cgctcgctgatgtccgccgataacgtacggcagcagctgtcgcgcatcatggaccgcttc
aacctgccacggcgcagcaccgagttcaccagccgagattactacatcaacatccgccgc
gcgcttgtcactggcttctttatgcaggtggcccacctggagcgtacagggcactatttg
acggtgaaggacaaccaggtggtccagctgcacccctccactgtgctggaccacaaacct
gagtgggtgctctacaatgagtttgtgctgaccaccaagaattacatccgcacctgcacg
gacatcaaacctgagtggctggtcaaaattgcaccgcagtactatgagatgagtaacttc
cctcagtgtgaagccaagaggcaactggagcgcattatcgctaaactccaaaccaaggaa
tactctcaatattaa
DBGET
integrated database retrieval system
