Colossoma macropomum (tambaqui): 118825594
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Entry
118825594 CDS
T09004
Symbol
si:ch211-106h4.9
Name
(RefSeq) rab effector MyRIP isoform X1
KO
K22237
Rab effector MyRIP
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118825594 (si:ch211-106h4.9)
Membrane trafficking [BR:
cmao04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118825594 (si:ch211-106h4.9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_eff_C
FYVE_2
Motif
Other DBs
NCBI-GeneID:
118825594
NCBI-ProteinID:
XP_036452160
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MGRKLDLSSLTEEEAEHVLQVVQRDMQLRKTEEERLSDLKQELDEEDSRCVLLSRQRSFN
QRCCIRCCSPFTFLLKPRRRCLDCHFNVCKRCCSYSTTDKGWLCSACKKSRLLKTQSLEW
FYSNVRRRFKRFGSAKVLKTLYRRHIAEQGSLAELTEGSTYDESVGNGDSVYESDSTFYK
HSEEHSMAETIGVALRVAEEAIDEAIAKAESQRDNQEKLKEACYLRDNRGELIEELTTTI
VQKIIRRKTDQSEMQPEHNPNCCPDQKSDVSSTASPTNRPRSALASQPSPKTSLWRSRSA
LSLFTDEMQHQHGKPQQRPMHCKDCTQGLTKDGISIPTLPSWKSVDRLDNSMLQSSDGNW
IALQSTQLSRPSLLTKRKSLVFSALEKESGVVSAYDGMGSDTEPDGDGTWCAALLEIRNK
MSSNNVPNNLQSTSPQPTLKSPTQPAADQAQTDSGRDTRVPKFHKSPFPFLKRKVPLECK
RSSSQRLSVMDINFNPESTESSEDGLEDSRVKRTRRRRRSKREYAEEKEFTALSSAEPDY
SRVLLDVLVKHRNKKQGASEFLSDQTMDTTTSDVQSSEAGTPDAFVPELEKNHVLSGSLE
NKLTSTLRELANQVSETHFSSTEDELDRVEEIGREGNDSAEDARGEGLWDMEVYAEKEEP
REIEEGEEQTECKKFLKVEISEAEMAKEVEESQKRQQTLEEDVVGPAVEDIRKEDQVDRE
FENSGTLTTDIIGHLHNEIQEPVNKQSESEMKKSGEIPQGVCLDYNSMRTGQLTELGKSE
IDNLDNANAEGQIKTTEDIAGCTTEIINEEKIEEDRSEGKNRDVAEPEQEKNSVEESTPQ
EPESLSETEQQRQTVGERPESGQQVKSQEIEKQMKETESTADNREDSLEDTASERKETEQ
DSDNHDLSTFMKKEEEVEYEIMLHSAVRTVNNMEEEIDTHNSKMRFSTLEDTERSEEEEE
IVAEERGVEEMTHDEEIEDDSEVEQNKERTSRNEQALERFMEKDSQHDLVEKTEEHTCVV
KAEECDCKDHILKEDLDCASYGQEVFLTPEEIYKKYTAASLRSITTEVLKVLNATEDLIQ
GTAGDGIGQSESRDLPSLPPAQSKRLDEQLCRLEENVYVAASAVFGLEAELGDLEECARS
ISGATSEGELAHLEEQVASVAAQVQQSELQVSDIAARIAALKNAGLNVAPQTRFAKPQTI
DSSRQHRRRLPAPPMQDKKA
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaagttggacctgtctagtcttacggaggaggaggcagagcacgtgctacag
gtggtgcaaagagacatgcagctgcgcaagacagaagaggagcgactgagtgatttgaag
caggagctggatgaggaggatagccggtgtgttttgctctcgcgtcagcgcagctttaac
cagcgctgctgcattcgctgctgctcgcctttcaccttcttgctcaagccacgccgtcgc
tgcctggactgtcatttcaacgtctgcaaacgctgctgctcttactccactaccgacaaa
ggctggctctgctccgcctgcaagaagagcagactgctgaagacccagtctctggagtgg
ttctacagtaatgtgaggagacgctttaagaggtttggcagcgccaaagtgctgaagacg
ctctacaggaggcacattgcagaacagggcagcctggctgaactcacagaaggaagtacg
tatgatgaaagtgtgggcaatggagacagtgtgtatgagagcgactccacattctataag
catagtgaagagcatagcatggcagagaccatcggtgtggcactgcgtgtggcagaagaa
gccatagatgaagccatcgccaaggctgagagtcaaagagacaaccaagagaagctgaaa
gaagcttgttacctacgggacaacagaggagaactgatagaggagctaaccaccacaatt
gtacagaaaattatccgcaggaagacagatcagtctgagatgcagccagagcataatccg
aactgttgtcctgatcagaagagtgatgtgagctctactgcttctcctaccaatcgaccc
cggagtgccctggcctcccagcccagccccaagacctccctatggaggtcccgatcagcc
ttgtctcttttcactgacgaaatgcagcatcagcatggcaaaccccagcagagacccatg
cactgtaaagactgtacacagggactgacgaaggatggaatctctatcccaactcttcct
agctggaagagtgtggaccgtctggacaactccatgttgcagagttcagacggtaattgg
attgcgctgcagagcacccaactctctcgacccagcctgctgacaaaacgcaagagcctg
gtgttcagtgctttggagaaggaatctggtgtggtctctgcatatgatgggatgggctct
gacactgaaccagacggtgatggaacctggtgcgcagccctgctggagattcgcaacaaa
atgtcctcaaacaacgtgccaaataaccttcagtccaccagcccacagccaacactgaaa
tctcccacacaacctgctgctgaccaggcccagactgactctggccgggacacccgagtg
ccaaaattccacaaatctccatttcctttcttgaagaggaaggtgcctctggaatgcaag
cgctcatcttctcagcgcctcagcgtcatggatattaactttaacccagagagcacagaa
agcagtgaagatggcctagaagacagcagagtcaaaaggacacgacggagaagaagaagc
aaacgagagtatgcagaggagaaagaattcacagccctgtcttcagctgaacctgactat
agtagggttctgctggatgttctggtaaaacaccggaacaagaaacagggtgcctcagag
ttcctgagtgaccagactatggacactacaacctctgatgttcagagctctgaggcaggg
actcctgatgcttttgtgccagagctggaaaagaatcatgttctaagtggctccctagaa
aacaaactgacatccacacttagagaactggccaatcaagtcagcgaaacacatttctcc
tccactgaagatgagcttgacagagtggaagaaattggtagagagggaaatgacagtgca
gaggatgcaagaggggaaggcttatgggatatggaggtgtatgcagaaaaggaagagcca
agagaaatagaagagggtgaagagcaaacagaatgcaagaaatttctaaaggttgagata
agtgaagcagagatggcaaaggaggtagaagaaagtcaaaagcgccagcaaacattggaa
gaagatgtagttgggccagctgtagaagatattaggaaggaagaccaggtagatagagag
tttgagaattcaggaaccttgactacagatataattggtcatctacataatgagatacag
gagccagtaaataaacaaagtgaaagtgagatgaagaaatcaggagaaattccacagggt
gtgtgcttagattataacagcatgagaacaggacagcttactgagcttgggaagagtgaa
attgataaccttgataacgctaatgccgagggacagattaaaactactgaagacatagca
ggttgtacaactgagataatcaacgaggaaaagattgaggaagacagatcagaaggaaaa
aacagagatgttgctgagccagagcaagaaaaaaacagtgttgaggaaagtacaccccag
gagccagagagcctttcagaaacagagcaacaaagacagacggttggagagagacccgag
agtggccaacaggtcaagagtcaggagattgaaaagcaaatgaaagagactgaaagcacg
gctgacaatagagaagacagcttagaggatacagcaagtgaaagaaaagaaacagagcaa
gacagtgataatcatgatttatctacattcatgaaaaaggaggaggaggtagaatatgaa
ataatgcttcacagtgcagtcaggactgtgaataacatggaggaggagattgacacacat
aacagcaagatgagatttagcacattagaagatactgaaaggagtgaggaggaagaggaa
attgtggcagaagaaagaggagtagaagagatgacacacgatgaagagatagaggatgat
agtgaggtggaacaaaacaaagagagaacgagtagaaatgaacaagcactggagaggttt
atggaaaaagacagtcaacatgacttggttgagaaaacagaagaacatacttgtgtggta
aaagcagaagagtgtgattgtaaagaccacatactcaaagaagatctggactgtgccagc
tatggtcaagaagtgtttctgacaccagaggaaatctacaaaaagtatactgctgcatca
cttcgcagtatcacaactgaggtgctgaaggttctgaatgccactgaagatctaattcaa
ggcacagcaggtgacggaatcggacagtcagaatcacgagacctgccttcactccctcca
gcccagagcaagagactggatgagcaactctgcagactagaggagaatgtttatgtggcc
gcgagtgctgtgtttggtctagaagctgagctgggtgatctggaggagtgtgcacgcagc
atcagtggagccacctcagagggagaactggctcacctggaggagcaagtggcctcagtc
gcagcccaagtgcagcagtctgaactccaggtatcagacattgcagcgagaatcgcagct
ctaaaaaacgcaggccttaatgtagccccgcagacacgctttgccaagccacaaaccata
gactcatctaggcagcatcggcgccgactaccagcacctccaatgcaagataaaaaggcc
tag
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integrated database retrieval system
