Colossoma macropomum (tambaqui): 118825632
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Entry
118825632 CDS
T09004
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118825632 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmao03021
]
118825632 (smarcd3b)
03036 Chromosome and associated proteins [BR:
cmao03036
]
118825632 (smarcd3b)
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118825632 (smarcd3b)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118825632 (smarcd3b)
PBAF complex
118825632 (smarcd3b)
GBAF(ncBAF) complex
118825632 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
TFIIA
Motif
Other DBs
NCBI-GeneID:
118825632
NCBI-ProteinID:
XP_036452229
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MASEDTAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGNPTVRPGL
TNPAMEANRKRPAPSQQQMQQQQQQQQQQAVQNRNRKKPVGFPGASEMPGRQMDMREAQS
DPTLGSNTKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRP
MKQKRKLRIYISNTFNPAKADAEDSDGSIASWELRVEGKLLDDPGKVKRKFSSFFKSLVI
ELDKDLYGPDNHLVELLSSKAQWHRTPSTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQF
KLDPRLARLLGIHTQTRSCIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFS
EIPQRLTNLLLPPDPIVINHIISVDPNDQKKTACYDIDVEVEDPLKAQMSNFLLSTANQQ
EIATLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEE
ERRAEFYQQPWSQEAVSRYFYCKIQQRRQELEQALAMRNT
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggaggacacagccggaggggcgcggaaagccaccaagagcaaactgttcgag
tttctcgtccatggagtgcgtcccggcatgccgtcaggtgcgaggatgcctcatcagggg
gcaccaatggggcctccagggccaccatacggaggaaaccccaccgtccggcccggactg
accaatccggccatggaggccaaccgcaaacgtcccgcaccctcgcagcaacagatgcag
caacagcagcagcagcaacagcagcaagccgtacagaacagaaacagaaagaagcctgtg
ggatttcctggagccagtgagatgccagggaggcagatggacatgagagaggcccaatca
gatcccacgcttggatcaaacaccaagaggaggaaaatggctgataagattcttccacaa
aggatccgtgagctagtcccggagtcccaggcttatatggacctgctggcattcgagcgc
aaactggaccaaaccataatgcgcaagcgggtggacatccaagaggcactgaaaagaccc
atgaagcaaaaacgcaaactgcgaatctatatctccaacaccttcaacccagccaaggct
gacgcagaggactccgatggcagcattgcatcatgggagctgcgggtggagggcaagcta
ctggatgatccaggaaaagtgaaaaggaagttttcctcattctttaagagcctggtcatt
gagctggacaaagacttgtatggaccagacaaccacctagtggagctgctgagcagcaag
gctcagtggcaccgcactccctccactcaggagactgatggcttccaggtgaaaaggccg
ggtgatgttaacgttcgctgcactctgctcctaatgctggactaccagcccccccagttt
aagctggacccacggcttgctcgtctgctgggcatccacacacagacccgctcctgcatc
atccaggccctgtggcagtacatcaaaaccaacaagctgcaggactcccatgacaaggag
tacatcaactgtgataagtacttccagcagatttttgactgccctcggctgaagttctcc
gagatccctcagcgcctcaccaacctgctgctgccccctgaccccatcgtcatcaatcac
atcattagtgtggaccctaatgatcagaaaaaaacagcctgctatgatatagatgttgaa
gtggaggatccactcaaagcccagatgagcaacttcctgctctccactgccaatcagcag
gagattgccaccctcgacaacaagatccatgagaccattgagtccatcaaccagctgaag
attcagagagacttcatgctcagcttctccagagatcctaaaggctacattcaggactgg
ctgaagtcccagagcagagacctcaaattgatgactgatgttgttgggaaccccgaggag
gagagaagggccgagttttaccagcagccctggtctcaggaggcagtcagtcgctatttc
tactgcaagattcagcaaaggaggcaagagctggagcaggccctggctatgaggaatact
tag
DBGET
integrated database retrieval system
