KEGG   Colossoma macropomum (tambaqui): 118825729
Entry
118825729         CDS       T09004                                 
Symbol
cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao04115  p53 signaling pathway
cmao04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118825729 (cop1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    118825729 (cop1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmao04121]
    118825729 (cop1)
Enzymes [BR:cmao01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118825729 (cop1)
Ubiquitin system [BR:cmao04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    118825729 (cop1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     118825729 (cop1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 Beta-prop_RIG_2nd zf-C3HC4_2 EIF3I Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd zf-RING_2 Beta-prop_EML Beta-prop_DCAF4 zf-RING_UBOX zf-C3HC4_3 Beta-prop_WDR90_POC16_2nd zf-RING_5 zf-C3HC4_4 RING_XB3-XBAT31 WD40_RFWD3 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 zf-RING_10 zf-rbx1 WDR90_beta-prop_4th UvrD-helicase zf_C2H2_10 Sina_RING Prok-RING_4 Tma16
Other DBs
NCBI-GeneID: 118825729
NCBI-ProteinID: XP_036452410
LinkDB
Position
Unknown
AA seq 696 aa
MSSGRQQHQSGGGAGSVPGTSSGSTAGSNSANIGSSNTTTNGSNTGSGVSSRTLGSGTEM
QLTSTQSGRPGSSGGSYSRKRPLYNGLINPYEDKSNDFVCPICFEMIEEAHMTKCGHSFC
YKCIRQSLEDSNRCPKCNYIIDNVDQLYPNFLVNELILKQKQRSEEKRLKRDHPNGTKWQ
FFQDVLGTDQENLDLANVNYMLELLVQKKKQLEAESQAAQRQILMEFLKEARRNKREQLE
QLQKELNFLEEDIKRVEEMSGMYSPVSDMDPSLDSTVPQFGEAPSPAHSIIEPTEYIQPP
QFGGSSQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNRMSRITDDSRTVNQLDDFMEC
LSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQ
DAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKR
CWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPTSRYHLAFGC
ADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNKPHCLRS
FKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKEDD
TNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq 2091 nt   +upstreamnt  +downstreamnt
atgtcaagcggtcggcagcagcaccagagcggcggcggagcgggatctgtgcccggtacg
agctccgggagcacggccggatctaacagcgcgaacatcgggagcagcaacactacgaca
aatggaagtaacacgggcagcggcgtttcttcccggacgctgggctcaggaactgagatg
cagcttacgagcacacagagcggcagacccggctcatctggtgggagttacagcaggaaa
agacctctgtacaatggtcttatcaatccatatgaagataaaagcaacgattttgtttgc
cccatatgttttgaaatgatagaggaagctcatatgacaaagtgtggccacagtttctgt
tataaatgtataagacagagtttggaagacagcaacagatgcccgaaatgtaattacatc
attgataatgtggatcagctctaccccaacttcttagtgaacgagctaattctcaagcaa
aaacagagatctgaggagaagcggctaaaacgggaccaccctaatggaaccaaatggcag
tttttccaagatgttcttggcacagaccaggagaatctggatttagcaaatgtcaactac
atgttggagcttttggtgcagaaaaagaagcagcttgaagcggaatcacaagcagctcag
cgtcagatcttaatggagttcttgaaagaagctagaaggaataaaagagagcaactggag
cagttacaaaaagaactcaattttttggaagaggacataaagcgtgttgaggaaatgagt
ggcatgtactcaccagtgagtgacatggatcccagtttggacagcactgttccccagttt
ggggaagctccctctcctgcacacagcatcatagaacccacagaatatatccaacctcct
cagtttggtggaagttcacagggtaaaagacagacatggtacaacagtactttggcttca
cgacggaagagactaacagcgcactttgaggatttggagcagtgctacttctccaaccgg
atgtcacgaatcacagatgacagcaggactgttaaccaactggacgatttcatggaatgt
ctgtccaaattcacacgttacaactctgtgcgacctctagctactctctcctacgcgagt
gacctctacaatggctccagtattgtttctagcattgagtttgaccgtgactgtgattac
tttgccatcgccggtgtcaccaagaaaattaaagtgtttgagtacgggacggtgattcag
gacgctgtggacattcattatcctgtcaacgagatgacgtgcaactccaaaattagctgt
atcagctggagtagctatcataaaaacctgcttgcaagcagtgactacgagggaacagtt
atcctttgggatgggttcacaggacagaggtcaaaagtttatcaggagcatgagaagaga
tgttggagtgttgatttcaacctgatggatcccaaactcttggcttcaggctcagatgat
gcaaaagtcaagttgtggtctactaacttagacaactcagttgccagcattgaagcgaag
gccaatgtgtgctgtgtcaagttcagcccgacgtctaggtatcaccttgcctttgggtgt
gcagaccactgtgttcattactatgacctgaggaacactaaacagcccatcatggtcttc
aaaggtcaccggaaggcagtgtcctatgccaagtttgtcaatggagaagaaattgtatct
gcctccacagacagccagctgaaactttggaatgtgaacaagccacactgcctgcgctct
ttcaaaggccacatcaatgagaagaactttgtgggcctagcctccaatggagactatgta
gcatgtggaagtgaaaacaactccctgtacctgtactacaaggggctctccaaaacgctt
ttgactttcaagttcgacaccgtgaagagtgttctggacaaggacaagaaggaagacgac
actaatgagtttgtcagtgccgtgtgctggcgtgcgctgccagatggggagtcaaatgtg
ctaattgcagccaacagtcaaggaacaatcaaggtactcgagttggtttga

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