Colossoma macropomum (tambaqui): 118825861
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Entry
118825861 CDS
T09004
Symbol
smarcd3a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118825861 (smarcd3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmao03021
]
118825861 (smarcd3a)
03036 Chromosome and associated proteins [BR:
cmao03036
]
118825861 (smarcd3a)
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118825861 (smarcd3a)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118825861 (smarcd3a)
PBAF complex
118825861 (smarcd3a)
GBAF(ncBAF) complex
118825861 (smarcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
118825861
NCBI-ProteinID:
XP_036452605
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MATEDSAGGARKATKSKLFEFLVHGVRPGMTSGPRMPHQGAPMGPPGPPFGGTSPIRPGM
PNPAMDPNRKRPTPTPPVQAPPVQSRPRKKPLGFPGASEISARQMDLREAQSEPAIGTNA
KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLR
LYISNTFNPAKADSEDSEGSIASWELRVEGKLLEDPGKQKRKFSSFFKSLVIELDKDLYG
PDNHIVEWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQ
TRSCIIQALWQYVKTNKLQDSHEKEYINCDKYFQQIFDCPRLKFCEIPQRLTNLLLPPDP
IVINHVISVDPNDHKKTACYDIDVEVDDPLKTQMSGFLLSTANQQEIASLDNKIHETIES
INQLKIQRDFMLSFSRDPKGYIQDWICSQNRDLKLMTDVVGNPEEERRAEFYNQPWSQEA
VSRYFYCKIQQRRQELEQALAMRTT
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggccacggaggattctgctggcggagctcgcaaagccaccaagagtaaactgtttgag
tttctcgtccatggagtgcgtccaggcatgacctcagggccccgaatgccccatcaaggc
gcccctatgggcccccctggtcccccgtttggaggtacatccccgatccggccagggatg
cctaaccctgcgatggaccctaaccggaaacgtcccactcccacccctcccgtgcaggct
ccccctgttcagagccggcctcgaaagaaaccactgggattcccaggagccagtgagatt
tcggcaaggcaaatggacttgcgagaggcccagtcagagccggcaattggaaccaatgcc
aagagaaggaaaatggcagacaagattctccctcagaggatcagggagctggtgcccgag
tcacaggcgtacatggaccttttggcttttgagcgcaagctggaccaaaccattatgagg
aagcgggtggacatccaagaggccctcaaaagacccatgaagcaaaaacggaagctccga
ctgtacatctccaacacgttcaaccctgcaaaggctgattctgaggactctgagggcagc
attgcatcctgggagctgcgggtagaaggcaagctacttgaagatcctggaaagcaaaag
aggaaattctcttctttcttcaagagcttggtaattgagctggataaggacctgtatggc
cctgataaccacatagtggagtggcatcgcactcccacgacccaagagacggatggcttt
caggtaaagaggccaggagatgtgaatgtgcggtgcactctgctcctcatgttggattac
cagcccccccagtttaagctggaccccagacttgctcgtctgctgggcatccacacacag
acccgctcctgcatcatccaggcgctgtggcaatacgtaaagaccaacaagctgcaagac
tcccatgaaaaggaatacatcaactgtgacaaatatttccagcagatctttgactgtcca
cgtctgaagttttgtgagattcctcagcggctcaccaacttgctgctgccgcctgatccc
attgtgatcaatcatgttatcagtgtggatcccaacgatcacaaaaagacggcctgttat
gacattgacgttgaagtggatgatcctctaaaaactcaaatgagtggctttctgctctcg
accgctaatcagcaggagatagcatcactggacaataagattcatgagaccattgagtcc
atcaaccagctgaagatccagagagatttcatgctcagtttctccagagatccaaagggc
tacatccaggactggatctgttcacagaaccgggaccttaagctcatgacagatgtggtg
gggaacccagaggaagaaaggagagctgagttttataaccagccctggtctcaggaagct
gtcagtcgctacttttactgcaagattcaacaacgaagacaagagctcgaacaggccttg
gccatgcgcacaacttaa
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integrated database retrieval system
