Colossoma macropomum (tambaqui): 118826485
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Entry
118826485 CDS
T09004
Symbol
irf4a
Name
(RefSeq) interferon regulatory factor 4a isoform X1
KO
K09445
interferon regulatory factor 4
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118826485 (irf4a)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
118826485 (irf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
118826485
NCBI-ProteinID:
XP_036453364
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MSGHHCRMRPLTGMNLDGDCSMSVNCGNGKLRQWLIEQIDSGEYPGLVWENDEKTIFRIP
WKHAGKQDYNREEDAALFKAWALFKGKYREGVDKPDPPTWKTRLRCALNKSNDFDELVDR
SQLDISDPYKVYRIIPEGAKRGSKSSSIEDTSAHVTPLSYSMHPPYPPLQSQMSSYVLSP
ERRDWREYSTEQPHHQPSHAELSYGPCPYPPARPLQWHAPPCDNGYQISGSFYTYTPTES
HPVSVDPSMRSAEAMAISDFRLHVALYYRESLVKEVTTTSPEGCRISSSPSPSSPSSPSS
PCPEDRLYGAGESVLFPFPYPQSQRRGADKLPNVLERGVLLWLTPDGLYAKRLCQSRVYW
EGPLAQYSDKPNKLEKEQTCKLMDTHQFLSELQGYIHHGRPMPRYQVVLCFGDEYPDPQR
QSKMITAQVEPMFARQLLYFAGQTNGHYLRGYEIPSQGALPVEDYQRSLQHMQE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtcaccactgtcgcatgcgtcctttaacaggcatgaatttagatggggactgc
agcatgtcagtcaattgtggcaatggcaaacttaggcagtggctcatcgagcagattgat
agcggggaataccccggcctggtctgggagaatgacgagaaaaccattttcaggataccc
tggaaacacgcgggaaaacaggactacaaccgcgaggaggatgctgctctgttcaaggct
tgggcgctgttcaaggggaaatacagggaaggggtggacaagccggaccccccaacttgg
aaaacgagactccgctgtgccctcaacaagagcaatgacttcgatgaacttgtggacaga
agccagttggacatctcagacccttataaggtctacaggatcatacctgaaggagcaaag
agaggctccaaatctagcagcattgaggacacctctgctcacgtgaccccccttagttac
tccatgcatcctccttatcctcctctccagtcccagatgtcgagctacgtgctgtcccca
gaaaggagggactggagggagtacagcacagagcagccgcaccaccagccgtcgcacgca
gagctgtcttacggcccgtgcccttaccctcctgcaaggcctctacagtggcacgcgccg
ccctgcgataatgggtaccagatatccggatccttctatacctacaccccgacagagtcc
catccagtgtcagtggaccccagtatgagatcagcagaagccatggccatctctgatttc
cgccttcacgtggccctctactatcgggagtccctggtgaaagaggtgacaaccacgagt
cctgaaggctgccggatctcctcctccccctctccatcctctccctcctccccctcctct
ccatgcccagaggacaggctgtatggggcgggcgagtctgtgctcttccccttcccctac
ccgcagtcacagcgccgcggcgccgacaagctgcccaatgtgttggagcggggtgtcctg
ctgtggctgacgcctgatggactttacgctaagcggctgtgtcagagcagggtgtactgg
gaagggccactggcgcagtactcggacaagcccaacaagctggagaaggagcagacctgc
aaactgatggacacgcaccagttcctctcagagttgcagggttatatccatcatggacgc
cccatgccaagataccaggtggtgctgtgctttggagacgagtacccagatccacagcga
cagagcaagatgatcacagctcaggtggagcccatgtttgccaggcagctcctgtacttt
gcgggccagaccaacggtcattacttgcggggttatgagattccttctcagggggcactg
cctgtggaggactaccagagaagcctccagcacatgcaggaatga
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