Colossoma macropomum (tambaqui): 118826529
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Entry
118826529 CDS
T09004
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118826529
Enzymes [BR:
cmao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
118826529
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
118826529
Prokaryotic type
118826529
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
118826529
NCBI-ProteinID:
XP_036453411
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MLCTQRRASAGRRAVNLIASAALLSSLELRAALLTFLPRRAASMYARRAELKRKAEALSS
AVEGKKQKAEEKSGGERGERGGRQAGWLQLEVDELRARNTGCKFNAKRVRFLSENQKVPQ
GCGGVLYWMARDQRVQDNWAVVYAQQLALAEKLPLHICFCLVPRYLDAAYRQYAFMIRGL
QKVAKECKSLDIQFHLLRGEPELTLPCFVKSWNFGAVVTDFNPLRLPLQWTEKVKKELPA
DVPFMQVDAHNVVPCWEASPKLEYGARTIRGKITKLLPEFLTEFPPVDVHPHPSTKTAKA
VDWEEVLSSVEVDRTVDEVKWAQPGTAGGMAMLESFIQHRLRLFATERNNPNSAALSQLS
PWLHSGQLSAQRVVKEVQRWGKNARESVASFTEELVVRRELADNFCFYNKNYDSIDGAYD
WAKKTLKDHAKDKRPYLYTQEQLENARTHDQLWNAAQRQLLLEGKMHGFMRMYWAKKILE
WTSSPEEALAIAIYLNDHYALDGCDPNGYVGCMWSICGIHDQGWAERAVFGKVRYMNYAG
CKRKFDVGQFERRYTVKTA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgctttgcacgcagcgccgcgcgtctgcaggccggagagctgtgaatctgatcgcctca
gccgctttactctcgagtttagagctccgagcggcgcttctgaccttcttaccccgccgg
gcagcgagcatgtatgcgaggagagccgagctgaagcggaaggcggaggcgctcagcagc
gctgtggagggaaagaagcagaaggctgaggagaagagtggaggagagaggggagagagg
ggagggaggcaggccggctggctgcagctggaagtggacgagctgcgcgctcgaaacacc
ggctgcaaattcaacgccaagcgcgtgcgtttcctctccgagaaccagaaggttcctcag
ggctgcgggggggttctgtactggatggcgagggaccagagggtccaggataactgggca
gtggtctatgcgcagcagctggctctagcggagaagttgcccctccacatctgcttctgt
ctggtgccgcggtatctggacgcggcctaccgccagtacgccttcatgatcagaggactg
caaaaggtggccaaggaatgtaagagtcttgacattcagttccacctcctgcgtggtgag
cctgagctgacgctgccctgctttgtgaagagctggaacttcggtgccgtggtgacggac
tttaaccccctcagactgcccctgcagtggactgagaaagtcaaaaaagagctgccagct
gacgtccccttcatgcaggttgatgcccataatgtggtgccgtgttgggaggcgtctcct
aagctggagtacggagccaggaccatcagagggaaaatcaccaaactcctcccagagttc
ctcactgagtttccacctgtggacgtgcatccacacccttccacgaaaacggcaaaggca
gtggattgggaggaggttctgagctctgtggaggtggaccggaccgtggatgaggtgaag
tgggctcagccgggcaccgcgggggggatggccatgctggagtccttcatccagcaccgt
ctgcgtctcttcgccacagagagaaacaacccaaactcagcggctctcagccagctctcg
ccctggcttcactccggtcagctgtctgctcagcgtgtggtgaaggaggtgcagcgctgg
gggaaaaatgccagggagtctgtggcctccttcaccgaggagctggtggtccgcagggag
ctcgccgacaacttctgcttctacaacaaaaactacgacagcattgacggcgcttatgat
tgggcaaagaagacgctgaaggatcatgctaaagacaagcggccttacctctacacacag
gagcagctggaaaacgccagaactcacgatcagctgtggaatgctgctcagaggcagttg
ctgttagaggggaagatgcacgggttcatgcgaatgtactgggccaaaaagattctggag
tggacctcgtcccccgaggaggctctcgctatcgccatttatctcaatgaccactacgca
ctggacggctgcgaccccaacggatatgtaggctgcatgtggtccatctgcggaattcat
gaccagggctgggctgagagggccgttttcgggaaagtgcgctacatgaactacgctggc
tgcaagcgcaagtttgatgtgggtcagtttgaaaggaggtacactgtcaaaacggcctga
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