Colossoma macropomum (tambaqui): 118826590
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Entry
118826590 CDS
T09004
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118826590 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmao03021
]
118826590 (taf6l)
03036 Chromosome and associated proteins [BR:
cmao03036
]
118826590 (taf6l)
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118826590 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
118826590 (taf6l)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
118826590 (taf6l)
STAGA complex
118826590 (taf6l)
TFTC complex
118826590 (taf6l)
SAGA complex
118826590 (taf6l)
SLIK complex
118826590 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
118826590
NCBI-ProteinID:
XP_036453490
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MTETREERRFAEVPRESIKLMAESAGVELGDDVAAMLAEDVCYRLREATQNSSQFMRHAK
RRKLTVEDFNRALRWSNTETICGYGAQDALPFRPLKEGELFFVEDREVNLVELALATNIP
KGCAETMVRVHVSYLDGKGNLEPQGTVPSAVQSLSDDLLKYYQQITRAILGEDPHLMKVA
LLDLQSNSKIAALLPYFVYVISGVKSVSHDLDQLNRLLHMVKSLVQNPYLYLGSYVRSLV
SSVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSD
PVRPLCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVY
GAILVAVERLLKMKAVSLSASAEGGTAALQSSAGGMMGFRESSPGLSPPPEPLSEPPLGI
ASHLQAGGAGCQWEEWTPVSLPDMYCELYSFFGDSLAVRFSTGPALGGAPSATPIQSSDA
RKEPGSGAANLESTRKMPQLTANMNISPRQDGSPRTEPAPPSLAATAPGRSLARSSSSSS
SSVPRSRSSSSRPGRSTSQSRDIFPKARFPPPQAGPPAFSFLIGGRQMGRRCQGRRFQTS
FTPTPSLTSLPPRAYAHKLPVIGRVSKPVRRWTCSHYSLYLPL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagacgagagaggagcgccgtttcgccgaggtgccccgagagtccattaaactc
atggccgagagtgctggggtcgagctgggagatgatgtagccgcgatgctcgctgaggat
gtttgttaccgcctcagagaggccacacagaacagctcccagtttatgagacacgctaag
agaagaaaactgaccgtagaggacttcaacagagctcttcgctggagcaatactgagacc
atctgtggctatggtgctcaggatgctctaccatttcgtccactgaaagagggagagctt
ttctttgttgaggatcgggaggtgaatttggtagaactggctcttgccactaacattccc
aaaggctgtgctgagactatggtgcgagtgcatgtgtcatatctcgatggaaaaggaaat
ctggagccacaaggcacagttcccagcgctgtgcagtctctgtccgatgacctactcaag
tattaccagcagatcactagagccatattaggagaggacccacacttaatgaaggtcgct
ttgctggatctacagtccaactccaagattgctgccctcctaccttactttgtttatgtc
atcagtggggtaaagtcagtaagtcatgacttggatcagctgaacaggctgctgcacatg
gtgaagagtctggttcagaacccgtatctgtatctgggctcatatgtgcgaagtctcgtc
tccagcgttatgtactgcatcttggagccacttgctgcctccattaatccactcaatgac
cactggaccctgagggactatgctgccctgcttctcagccatatcttctggacccatggt
gacctggtgagtggactgtaccatcagatccttctgtcgctgcagaaggttctgtcagac
ccagtccggcctctctgctctcactatggagctgtggtcggcttgcatgcgcttggttgg
aaggctgttgagcgtgtgttgtatccccacctgccagcctactgggcgaacctgcaggcc
gtgctggacgattattctgtgtccaacgcacaggtgaaagcagacggacacaaagtctat
ggagccattcttgtggcagtggaacgcttgctaaagatgaaggctgtgagtctgtctgca
tctgcagaaggtggcactgctgctcttcagagttctgctggggggatgatgggcttcaga
gagagttcaccaggcctgagccctcctcctgaacctctctctgaacctccgttgggcatc
gccagccacctgcaggcaggcggcgcaggatgccagtgggaggagtggacccctgtctca
ctccctgacatgtactgtgagctgtactccttctttggagacagtctggctgtgcgcttt
agcactggccctgcactaggtggtgccccatctgccacccctattcagtcttcagacgcc
aggaaagagccaggcagtggtgcagctaacttggagagtacacgcaaaatgcctcagctc
actgccaacatgaacatcagccccaggcaggacggaagcccacgcactgagccagcacca
ccaagtttggccgctacagcaccagggaggtctctggcccgctcttcttcctcttcctca
tcctcagtccctcgctccaggtcatcctcctcccgtcccgggcgctcaaccagccaatcc
cgagacattttcccaaaagctcgcttcccccctccccaggccggcccgccagccttctca
tttttaattggaggacggcagatgggccgacgatgccagggacggcgcttccagacaagc
ttcaccccgactccatcacttacctcccttccacctcgggcctatgcccacaaacttcca
gttattggaagagtgagcaaaccagtgagacgctggacgtgctcccattactcactgtac
ctgcctctttaa
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