KEGG   Colossoma macropomum (tambaqui): 118826902
Entry
118826902         CDS       T09004                                 
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03022  Basal transcription factors
cmao03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    118826902 (gtf2h3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    118826902 (gtf2h3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmao03021]
    118826902 (gtf2h3)
   03400 DNA repair and recombination proteins [BR:cmao03400]
    118826902 (gtf2h3)
Transcription machinery [BR:cmao03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     118826902 (gtf2h3)
DNA repair and recombination proteins [BR:cmao03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     118826902 (gtf2h3)
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 118826902
NCBI-ProteinID: XP_036453855
LinkDB
Position
Unknown
AA seq 301 aa
MASEDEISLLVIVVDVNPIWWGQQAQREPEFTLSKCLDAVMVMANSHLVMTRTNKLAIIA
SHCQESHFLYPSKHWKAGDIAGDDASSGSGDGKYELLSVANDLIAEEIRNLMARTQVKGH
QTDTLLAGSLAKALCYIHRISKELDAGQDMKSRILVVKAAEDCALQYMNFMNVIFAAQKQ
NVLIDACVLDSDSGLLQQACDITGGLYLRIPQKTALVQYLLWVFLPDADQRSQLVLPPPV
HVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIPLPQMMKPKKKKLKAA
N
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcttcagaagatgaaattagtcttctggtcattgtggtggatgtcaacccaatttgg
tggggtcaacaggcacagagagaacctgagttcaccctctcaaaatgcctggatgctgtg
atggtcatggcaaactctcacttggtgatgaccagaactaacaagctggccatcattgct
agccactgtcaggagagtcacttcttataccccagcaagcactggaaagcaggtgatatc
gctggagatgatgcatcatctggtagtggggatggcaaatatgagctcctatcagtggca
aatgacctcattgctgaagaaatcaggaatctcatggccagaacacaggtgaaaggtcac
cagacagacaccttattggctggatcccttgccaaagctctttgctatattcatcggatc
tccaaagaattggatgctgggcaagacatgaaatcaaggatattggtggtgaaagcggct
gaggattgtgctctgcagtacatgaactttatgaatgtaatttttgctgcacagaaacag
aatgtcctgattgatgcatgtgtgttggactctgactcaggccttttgcagcaggcttgt
gacataacgggaggcttgtacctgaggataccgcagaagaccgctctagtgcagtactta
ttgtgggtgtttctgccagatgcagaccagcgttcacagctagttcttcctccaccggtg
catgtggactacagagcggcctgcttctgtcatcgtaaccttattgagatcggctatgtc
tgctcagtgtgcttgtcaatattctgcaacttcagtcctatctgcacaacatgcgagact
gcttttaagattccattaccacagatgatgaaaccgaagaagaagaaacttaaagctgca
aactga

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