Colossoma macropomum (tambaqui): 118827243
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Entry
118827243 CDS
T09004
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118827243 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cmao01007
]
118827243 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmao03016
]
118827243 (tars1)
Enzymes [BR:
cmao01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
118827243 (tars1)
Amino acid related enzymes [BR:
cmao01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
118827243 (tars1)
Transfer RNA biogenesis [BR:
cmao03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118827243 (tars1)
Prokaryotic type
118827243 (tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
118827243
NCBI-ProteinID:
XP_036454428
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MADEAVTEQIKGLQVGEGKQGGTPDKAGKDGAKKKNKGAGGDTSGRTELSPPPQYIDDRL
VLYNKLKAEHDALMAERAEKGSKPIKITLPDGKVVDGESWKTTPYQVACGISQGLADNTV
IAKVNNAVWDLDRPLEGDCSLQLLKFDDEEAQAVYWHSSAHIMGEAMERIFGGCLCYGPP
IENGFYYDMYLENEGVSSNDFPCLENLCKKIIKEKQPFERLEIKKETLLEMFKYNKFKCR
ILNEKVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMESLQRVY
GISFPDPKMLKEWEKFQEEARNRDHRKLGREQDLFFFHDLSPGSCFFLPKGAYIYNTLVE
FIRSEYRKRGFQEVVTPNMYNSKLWQTSGHWQHYSENMFSFEVEKEIFALKPMNCPGHCL
MFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSMDQIESEIKG
CLDFLRAVYNVFGFTFKLNLSTRPEKFLGEPEVWEQAEKQLENSLNEFGEKWVLNPGDGA
FYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSPDGDDKKRPVIIHRAILGSVE
RMIAILTENYGGKWPLWLSPRQVMVVPVGPTCEEYAQRVREEFHSAGLMTDVDLDPGCTL
NKKIRNAQLAQYNFILVVGEKEKISDTVNVRTRDNKVHGERSLTECMERLKQLKASRARN
AEEEF
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggctgttactgaacaaataaaagggctgcaagtcggcgaaggcaagcag
ggtggaacaccagacaaggctggcaaagatggagcaaaaaagaagaacaaaggagctgga
ggagacacgagcggcagaactgagctcagtcccccacctcaatatatagatgatcgtctg
gtcctgtacaacaagctgaaagctgagcatgatgctttgatggctgagagggcagagaag
ggcagcaagcccataaagatcacccttcctgatggaaaagtagtggatggagagtcctgg
aagaccacaccataccaggtcgcctgtggcatcagccaaggcctcgctgataacactgtg
attgccaaagtgaacaatgctgtgtgggacctggacagaccattggagggagactgtagt
ctgcagctgctgaagtttgatgatgaggaggcacaagcagtctactggcactcaagtgcc
cacattatgggggaggccatggagagaatctttggaggctgcctgtgttacggacccccc
atcgagaatggcttctactatgacatgtatcttgaaaatgaaggtgtatcgagtaatgac
ttcccctgtctggagaacctgtgtaagaagatcatcaaggagaagcagccctttgagagg
ctggagataaagaaggagactctgctggaaatgttcaagtacaacaagtttaagtgcagg
atcctgaatgagaaagttaccaccccaacaactaccgtttacaggtgtggccccttgatt
gacctgtgcagagggccccatgtaagacataccggaaagatcaaggctttgaagatccat
aagaactcctccacatactgggaaggtaaggcggacatggagagcctacagcgagtctac
ggtatctcgttccctgaccccaagatgctgaaggaatgggagaaattccaagaggaggcc
aggaacagggaccaccgcaaactgggacgggaacaggacttgtttttcttccatgacctc
agccctggtagctgtttcttcctcccaaagggagcgtacatctacaacacactggtggag
tttataaggagtgagtacaggaagagggggtttcaggaagtggtcactccaaacatgtac
aacagcaagctttggcagacctccggccactggcagcactacagcgagaacatgttttcc
tttgaggtggagaaggagatctttgccctcaaacccatgaactgccctggacactgtctg
atgtttgaccatcggccacgctcttggagagagctgcctttgcggctggctgatttcggg
gtcctgcaccgtaacgagctctccggagccctaaccggtctgacccgcgtccgccgcttc
cagcaggacgacgcccacatcttctgctccatggaccagattgagtcagagattaagggc
tgtctggacttcttacgtgctgtgtacaacgtgttcggcttcacctttaaactgaacctc
tccaccagaccagagaagttccttggggaaccagaagtgtgggagcaagctgagaagcaa
ctcgaaaacagcctgaatgagtttggtgagaagtgggtgttgaacccaggagatggtgct
ttctacggacccaagattgacattcaaattaaggatgctattggcagataccaccagtgt
gccactattcagctggactttcagctacccatccgtttcaatctaacctttgtcagtcct
gatggagatgataagaagaggccagtgatcattcacagagccattctgggttctgtggag
aggatgattgccatcctgacagaaaactacggtgggaagtggcctttatggctttctcca
cgtcaggttatggttgtgcctgttggacccacttgtgaagagtacgcccaaagggttcgt
gaggagttccacagtgctggcttgatgacagatgtagacttggacccaggctgcactcta
aataagaagatcagaaatgcgcagttggctcagtacaactttatcttggtggtgggcgag
aaggagaaaataagcgatacggtgaacgtccgcactcgggacaacaaggtccacggggag
aggagcctgacagaatgcatggaacgcctgaaacaactgaaggcatcgagagcccgcaat
gctgaagaggaattctga
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