Colossoma macropomum (tambaqui): 118827397
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Entry
118827397 CDS
T09004
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03022
Basal transcription factors
cmao03420
Nucleotide excision repair
cmao04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118827397 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
118827397 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118827397 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cmao01001
]
118827397 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmao03021
]
118827397 (cdk7)
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118827397 (cdk7)
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118827397 (cdk7)
Enzymes [BR:
cmao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
118827397 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
118827397 (cdk7)
Protein kinases [BR:
cmao01001
]
Serine/threonine kinases: CMGC group
CDK family
118827397 (cdk7)
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118827397 (cdk7)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
118827397 (cdk7)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118827397 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
Haspin_kinase
RIO1
APH
Motif
Other DBs
NCBI-GeneID:
118827397
NCBI-ProteinID:
XP_036454635
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MALDVKSRTKRYEKLDFLGEGQFATVYKARDKTTNTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYMHSHWILHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRVPFLAGDSDLDQLTKIFEALGTPTEDTWPGM
TSLPDYVSFKLFPGTPLEHIFSAASDDLLELLRGLFTFNPCTRLTATKALKMRYFSQRPA
PTPGPQLPRPNSSAEALKEKENLTIGIKRKRDGIEQGTLKKKLVF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggctttggacgtgaagtccagaacgaagcggtacgaaaaactggactttcttggagag
ggacagtttgccactgtttacaaggcaagagacaaaactacaaataccattgttgcaatt
aagaagattaaagtcggacacagaacagaggccaaagatggcatcaacagaacagctctc
agagagattaagttgttgcaagagctaagccatccaaacattattggactccttgatgcc
tttggacacaaatccaacatcagcctcgtgttcgacttcatggagacagatctggaggtg
atcataaaggacactagtcttgtactgacaccagccaacatcaaggcatacatcctgatg
accctgcagggactagaatacatgcacagtcactggatcctacacagagatttaaagccc
aataatttactgttagatgaaaatggggtcctgaaacttgcggattttggattggcaaaa
gcctttggaagccctaatagagtctatacgcatcaagtagtgaccagatggtaccgttct
ccagagctgctctttggggccaggatgtatggtgtgggtgtggacatgtgggctgtgggc
tgcatccttgcagaactccttctcagagtaccatttctggctggagattctgacctggat
caattgacgaagatatttgaagctttggggactccaacagaagacacttggcctggaatg
accagtcttccagactatgtgtccttcaaactgtttccgggcacacctttggagcacatt
ttcagcgcggctagtgacgaccttctggaacttctgcgaggcctattcacctttaaccct
tgcacgcgcctcacagccacaaaggcactgaagatgagatatttcagccagagaccagcc
cccaccccagggcctcagctcccccgaccaaactcttcagctgaagctctgaaagaaaaa
gaaaacctcaccattggcattaagagaaaacgtgatggtattgaacaaggcaccctgaag
aaaaagctggtgttttag
DBGET
integrated database retrieval system
