Colossoma macropomum (tambaqui): 118827411
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Entry
118827411 CDS
T09004
Name
(RefSeq) protein HIRA
KO
K11293
protein HIRA/HIR1
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmao03036
]
118827411
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
118827411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
NBCH_WD40
HIRA_B
WDR90_beta-prop_4th
Beta-prop_RSE1_2nd
Beta-prop_EIPR1
WD40_like
Motif
Other DBs
NCBI-GeneID:
118827411
NCBI-ProteinID:
XP_036454657
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MKLLKPSWVSQNGKPIFSVDIHPDGTKFATGGQGEDSGKVVIWNMAPVLREEDEKNENVP
KMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWKKAAFIGPSTVFGSSSKLANVEQ
WRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPEIVTTLKGHTGLVKGL
TWDPVGKYIASQADDHSLKVWRTMDWQLDTNITKPFSECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQRNGSAPKPSCPYCCC
AVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDITWTLNGLGMLVCSMDGTVAFLDFSQD
ELGDPLNEEEKNTIHQNIYGKSLAITMETQLSSTIIENPEMLKYQQERPGAQASSGTQGA
SLENQTPKLTNVVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSPALFN
SVPILPGSSAAPQLTPQLSSDSNTANSLCLRANQEPAASPTKTATDDKDNGTPAVNSAGQ
KSNLLLTAASKIEPMKALDSRFTERSKATPGVTSAPANMGISSLDRVKDSGGVKDWKMKE
ETSSDSEDKVQKAPPLAKRKADMEGAEVVEKRKKGRPRKDAKLMMAVPQAYPQTPVSVEK
ETARIPAPTISLKLHTPAIQKSFTIQVGTDPVLYLEVENEASVVAGARISQLRCSREGRE
WDTFLPSRIATATGSSDVVAVACEDRTLSVFSACGRRLLPSIMLPAPISSLHCSAFFVMA
LTASATLSVWDVQKQVALVKNESLNSILLGSDATVSHSMLTDQGVPVVGLSNGKSFCFSS
AMETWNLIVDKQDALVQCADFRNCVSSQEALGSTGPLAATQGRSLSASRLASRLSSAPHH
LQQGMTLAFLEQQLSSALILRSTAEYRHWLLIYTRFIVNEGYEQRLRELCKDLLGPVHKS
SSSSWEPTVLGLRKRDVLAEVLPVIGQNLRFQRLFTEYQDQLEIVRLK
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgaaaccgagctgggtctctcagaacgggaaaccgatattttcagtcgat
attcatccagatggaacaaagttcgccacaggtggtcaaggggaggactcggggaaggtt
gtcatttggaacatggctccggttctccgagaggaggatgagaaaaatgagaacgttccc
aagatgctttgccagatggacaatcatttagcatgtgtgaactgcgtgcgctggtccaat
aacggtctgtatctggcctcgggaggggacgacaaactggtcatggtgtggaagaaagca
gcgtttatcggtcccagtacggtgtttgggtcgagcagtaaactggccaacgtggagcag
tggagatgtgtgaccatcctcagaaaccacacaggagatgtaatggatgtggcctggtcc
cctcatgatgtttggttggcctcctgcagtgtggacaacactatcgtcatctggaacgct
cggaaattcccagagatcgtgacgactctgaaaggtcacactggtctggtgaagggttta
acgtgggatcctgtagggaagtatattgcgtcccaggctgatgaccacagtctgaaggtg
tggaggactatggactggcaactggacaccaacatcaccaagccattcagcgagtgtggt
ggtaccactcatgttcttcgtttgagctggtctcctgatggtcagtatttggtgtctgcg
cacgccatgaataactccggaccgacggctcagataattgagcgagacggctggaagacc
aacatggacttcgtcggccatcgcaaggctgtcactgtggtgaagtttaacccgaagatt
tttaagaagaaacagcgtaacggcagcgcccccaaacccagctgcccgtactgttgctgc
gctgtgggcagcaaggaccgctcactgtctgtctggctcacctcactgaaacgccctcta
gtggtcattcatgacttgtttgataagtccatcatggatattacatggactctgaatggt
ctgggaatgctggtgtgctcaatggatggaacggtggcttttctggacttttcccaggat
gagctgggagaccctttaaatgaggaggaaaagaacaccattcaccagaatatatacgga
aagagcctggctatcaccatggagacgcagctttcctccaccattattgagaacccggag
atgctgaagtatcagcaggagcggccgggggcccaagcctccagtggtacccagggagcc
agtctggagaaccaaacgcccaaactgaccaacgtggtcaacggcgagtctctggaggac
attcgcaagaatctgctgaagaagcaggtggagacccggacagcagacggccggaggagg
atcactccactctgtatcgcccagttggacacaggggatttctctcccgctctgtttaac
agtgtacccatcctgcctggttcctcggcagccccccagctgaccccccagctctcctct
gactccaatacagcaaactctctctgtctgagagccaatcaggagcctgcagcatcgccc
actaaaactgccactgatgacaaggacaatggaactccagccgtaaactccgctggtcag
aaatccaatctgctactaaccgctgcttcaaagatcgagccaatgaaagccctggattca
cggttcacagaaaggtcaaaggccacacctggggtcaccagtgcacctgccaacatgggc
atttcttcacttgacagggtgaaggacagcggaggcgtgaaggactggaagatgaaggag
gagacgagcagcgacagcgaagataaagtgcagaaagcgccacctctggccaaacggaag
gctgacatggagggggcagaggtggtggagaagaggaagaagggaagacccagaaaagat
gctaaactgatgatggctgtgccacaggcgtacccacagactccagtctcagtggagaag
gaaacggcgcggatcccagctcctacaatatcattaaaactccacacccccgcaatacag
aaatctttcaccatacaggtaggtacggaccctgtcttgtacctggaggtggagaatgag
gcttctgttgttgctggggctcgtattagccaactcaggtgcagcagagaaggaagagag
tgggacacctttctccccagccgcatcgcaacggcaacagggagcagcgatgtggttgcc
gtggcgtgtgaggaccgaacgctgtctgtcttctcagcgtgtgggcggagacttcttcca
tcaatcatgctgccagcccccatatcatcactgcattgctcagcctttttcgtcatggcc
ctgaccgcatcggccaccctgtccgtctgggacgttcagaaacaggtggctctggtcaaa
aatgaatctctgaactccatcttattaggttctgatgctacagtaagtcactctatgttg
actgatcagggtgttcctgtggttggactgtccaatgggaaatccttctgtttcagctct
gctatggagacgtggaatctgatagtagataagcaggatgctctagtgcagtgtgcggac
ttcaggaactgcgtctcttcccaggaggcactgggctccacagggccactggctgctacg
caggggcggagtctgagtgcgagccggctggcgtcccgtctgtcctccgccccccaccac
ctgcagcaggggatgaccctggccttcctggagcagcagctctcctccgcactcatcctg
cgctccaccgctgagtatcgccactggctgctcatctacactcgcttcatcgtcaacgag
ggatatgaacagcgtttacgggagttgtgtaaggatttgctgggaccagtacacaaatcc
agcagcagctcctgggagcccacagtgctgggtctgaggaagagagatgtcttagcggag
gttttgcctgtgattggtcagaatctgcgctttcagaggctcttcaccgagtaccaggac
cagctggagatagtccgcctcaaatag
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