Colossoma macropomum (tambaqui): 118827412
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Entry
118827412 CDS
T09004
Name
(RefSeq) spermatid perinuclear RNA-binding protein-like isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118827412
Spliceosome [BR:
cmao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118827412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_C
DZF_N
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
118827412
NCBI-ProteinID:
XP_036454658
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MMEETTDNSLGSLASDDSYVMAKHSAIYPSAEELEAVQSLVSVVEGGLKQVSDWLTNSAK
ASVVICKDLAEPNSKCGGPLVGVVRVGSVAKGLLIKGIMDLELVLLCREKPTGKLLLTIC
TNLPLQMKKLTEDSYTVQPCIPEAAILVFKSSRPDLPLRVTLTSMEMKSKEPEKGQVENT
KAKDSSDLLDQQRCLLALTSLRHAKWFQVRVSGKKSCLIVLRILRDICIKRPAWEPLKGW
PLELICEKAVATSYRPLGPSEALRRVLGCISSGILLPGGPGLRDPCEKEQVDTLSGMSSD
QAELLTHTAQHALRLLAFGQIHKFLQMDPLPSAKPAVEQKLAEAGMSQKRLSEDETMEEP
RSKRTNSTNVGSLSAEDKSDGKRKVETFSKSSSNNRTKSSSLAKGKSQGPVLTSRGKNPV
MELNEKRRGLSYDLITENGESQQQRFIIEVQVDGLRFRGCGPNKKVAKANAALAAIERLF
SAHSTNSNKKKRSYPKANPATNGFHRGKRGITMPRPVLPLLPPAPAYFTPGYAPYAYGPV
VPQPYGGLYFDSPVCPPQTIAPVFIHLGPQDFYPDFYI
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggagaccactgataattctcttggatcgctggccagtgatgactcttatgtg
atggccaaacactcagccatttacccgtcagccgaagagctggaggctgtccagtctctg
gtgtcagttgtggagggaggcctaaagcaggtttcagactggctaactaattctgcaaag
gctagtgttgttatatgtaaggacctggcagaacccaactcaaagtgtggtgggccgttg
gttggcgtggtgcgtgtcggatcagtggccaagggcctcctgatcaaggggataatggac
ttggagctggtcttgctgtgccgagagaaacccaccggaaagctgcttctcacaatctgc
acaaacctgccactgcagatgaagaaattgacagaggacagctacacagtgcagccatgc
attccagaggcagctattctggtattcaaaagcagcagacctgatctgcctctcagggtc
accctcacctcaatggagatgaaaagcaaagagccagagaaaggccaagtggaaaacaca
aaagcaaaagattcgtctgatctgctggaccagcagagatgcctccttgctctgacctct
ctgcgacatgccaaatggttccaggtcagggtaagtggtaagaagtcctgtctcatagtt
ctgaggatcctcagggacatatgtatcaagaggccagcctgggaacctctcaaaggatgg
cctttggagctgatctgtgagaaggccgttgccacaagttacaggccactggggcccagt
gaggctctccgaagggtcttgggttgcatatcctcaggcatactgctgccaggtggacct
ggattgcgtgatccatgtgaaaaagagcaagtagacactttatcaggcatgtcaagcgat
caagctgagcttcttacgcacactgcacagcacgcgttacggctcttagctttcggccag
attcacaagttcctccagatggatcctcttccttcagctaaacccgctgtggaacaaaaa
ttagcagaagcagggatgtctcagaaaaggcttagtgaggatgaaacgatggaggaacca
aggagcaagaggacaaacagtactaatgtaggctcgttgtctgctgaggacaaatcagat
ggtaagaggaaagtggagactttctccaaaagttccagcaacaatcgcacaaagagctct
tccttagccaagggtaaaagtcagggtcctgtcctcacatctaggggcaaaaacccagta
atggagctgaatgagaagaggagagggctttcatatgacttaatcactgagaatggagag
agccaacaacagcgcttcatcattgaggtgcaagtggatggactgaggttcagaggatgt
gggccaaataaaaaagtggcaaaggcaaacgcagcactggcagcgatagaaagactcttc
tcagcacacagtacaaacagcaacaagaagaagaggtcctacccaaaggcaaatccagcc
acgaatggctttcatcgagggaaaaggggtattacaatgcccaggccagtgcttcctctc
cttcctccagcccctgcgtactttaccccaggctatgctccttatgcttatggaccagtt
gtcccccagccgtacggtggtctgtacttcgacagtcctgtttgccctccgcagaccatc
gctcctgtttttattcacctgggtccacaagatttctaccccgatttttacatttaa
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