Colossoma macropomum (tambaqui): 118827443
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Entry
118827443 CDS
T09004
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118827443 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cmao03310
]
118827443 (rorb)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118827443 (rorb)
Nuclear receptors [BR:
cmao03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
118827443 (rorb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TraC
DUF4355
Motif
Other DBs
NCBI-GeneID:
118827443
NCBI-ProteinID:
XP_036454702
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MKSDVVAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDR
TNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQQTGEA
EALARVYSSGLSSGLGSLGHDIGGAYANGHLIDMPKGQANGAPAGYYSMDSTQPSPDQSG
LDMAGMKQIKQEPIYDLTPVPNLFPYSSYQDSQLAPGVSMGELDRIAQNIIKSHLETCQY
TAEELQQLAWQTHSYEEVKMYQSKSREVLWQQCAIQITHAIQYVVEFAKRITGFMELCQN
DQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSL
CSLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKL
IGRIPTLAALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDAASVMPK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagatgttgtagcccaaatcgaagttataccatgcaaaatctgtggagacaag
tcctcagggatccattacggggtcatcacgtgcgaggggtgtaagggtttcttcaggagg
agtcaacagaacaatgcctcatactcctgccctcgccagcgcaactgtctgattgacaga
accaaccgcaaccgatgtcagcactgcagactgcagaaatgcctggctctgggcatgtcc
cgggatgcggtgaagttcggccgcatgtctaaaaagcagcgggactcactgtatgcggag
gtgcagaagcaccagcagcgtctgcaggagcagcggcagcagcagcagacgggtgaggcc
gaagccctggcccgcgtttactcctctggactctcgtctggccttggaagccttggtcac
gacattggcggcgcgtatgccaatggccaccttattgacatgcccaagggccaggccaac
ggcgccccggccggatactacagcatggactccacccagcccagcccggaccagtccggc
ctggacatggccggcatgaagcagatcaagcaggaacccatatatgacctgactcccgtg
cccaacctcttcccctacagctcgtaccaggacagccaactagcaccaggagtttccatg
ggggagctggaccggattgcgcagaacatcataaagtcccacctggagacgtgccagtac
acggccgaggagcttcagcagctcgcctggcagacgcactcgtacgaggaggtcaagatg
taccaaagcaagtcgcgggaggtgctgtggcagcagtgtgcgatccagataacccacgcc
attcagtatgtggtggagtttgccaagcgcatcactggcttcatggaactctgtcagaat
gaccagatactactgctcaaatcaggttgcctggaggtggtgctggtcagaatgtgcagg
gcgttcaatcctctcaacaacactgttctgtttgaggggaaatacggaggcatgcagatg
tttaaagcacttggctgtgacgatctcgtcagtgcagtgtttgactttgcgaagagtttg
tgctcattgcagttgacagaagaggagatcgctctgttctctgcagcggttctcatctcc
acagatcgtccctggctaatggaaccaaggaaagtacagaagctacaggagaaaatctac
tttgctctccagcacattatgcagaagaaccatatggatgaggacgcgttggccaagctt
attggtcgaatccccacattggcagcgctgtgcactctgcatacggaggaattgcaggcc
ttccagcagttacaccctgaaacggtcaatgtgcttttccccccgctttataaggagctc
ttcaaccccgacgctgccagcgtcatgcccaagtga
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