KEGG   Colossoma macropomum (tambaqui): 118827544
Entry
118827544         CDS       T09004                                 
Symbol
msh3
Name
(RefSeq) DNA mismatch repair protein Msh3
  KO
K08736  DNA mismatch repair protein MSH3
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    118827544 (msh3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmao03400]
    118827544 (msh3)
DNA repair and recombination proteins [BR:cmao03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     118827544 (msh3)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV Mo-nitro_C
Other DBs
NCBI-GeneID: 118827544
NCBI-ProteinID: XP_036454840
LinkDB
Position
Unknown
AA seq 1094 aa
MHSNFKRTSAAKTAKKSSAQTTISRFFSGKAADVGRSGISCDGPAQEGRGKKRLTLPDRT
ESLEKRAKLCHDGEEVEKERMEEDFSSSIKHERASTSKGSLSCSTLEKLRGFSCQGDRES
RAPDPVKTEKMEMEAIDKVDQQVKMEEGTEEDSSQNKQGFNFGKFAKAGSSGGGFGGVTK
KTPPEPAGPNRRTKSIYTPLEQQYMEIKEQYKDTILCVECGYKYRFFGEDAEIAAKELNI
FCHLDHNFMTASIPTHRLFVHVRRLVSQGYKVGVVKQTETSAIKASSANKSSLFTRQLSA
LYTKSTLVGEDVNPLLTLGDLEQAEDVVQDMPNSYLICVSENWDKQSKELTIGLVVVQPS
TGDVMVDCFGDNASRSELEARVLKIQPVEILVPSNLSEPTERLLRTIALSSVQADDRIRI
EKRESTQFEYPTAVMTVKEFYSSTSTQTLENREKGSGLFYLSLESPVICCLGPVIQYLTE
FKLERVLLCSSSFKRLSNDADHMVFSATTMKNLEIFCNQTTGSVKGSLLWVLDHTHTPFG
KRLLKKWVSQPLKSASEIRSRQDAVAEILSSESSVLPSIQALLTRLPDLERGLCSIYHKK
CSTQEFYLISSTLSRLSTELQALIPALQSQLRSDFLKSMLLDTPQLLSPAHSFLKVLNEK
AAKTGNKTELFADLTDFPLIRERKDEIQAVLSDIIEHRRELRLVLRNPSLDYVTVSGQEF
LIEVKNSMSSIVPPDWVKINSTKMVGRYHSPFIVERHRCLLQLREQLVIDCGREWINFLQ
LFGEHYYILRKAVGHLATMDCLFSLAQVAKENNYCRPEVLEHERHIAIKEGRHPVIDILM
GEQDQYVPNDTELQGDGKRAMIITGPNMGGKSSYIRQVALITIMAQLGSFVPAAEASVGI
VDGIFTRMGASDNISRGRSTFMEELLEASEILSRATARSLVILDELGRGTSTHDGIAIAY
ATLEFFIRDVRCLTLFVTHYPPLCELEKLYPQHVGNYHMAFLLNEPETAADEEEVQPEFI
TFLYQLTEGAAGRSYGLNVARLANIPESILGTAALKSKELEAIVNSRRKTVKLLSEAWKI
TNREALLEWKKLNL
NT seq 3285 nt   +upstreamnt  +downstreamnt
atgcattctaattttaaaaggacatcagcagcgaagactgctaagaagtccagcgcacag
acgactattagcaggttcttcagcggtaaagctgctgatgttggtcggtctgggattagc
tgcgatggtcctgctcaggaaggcagagggaagaagagactaacgttgcctgacagaaca
gagtccttggagaaacgggctaaactgtgtcatgatggggaagaagtggaaaaggaacgg
atggaagaggacttcagcagcagcatcaaacatgagagggcatcaacctctaagggcagt
ctctcctgctccactctggagaaactgcgaggcttcagctgccaaggggaccgtgagagc
agagctccagaccctgtgaagactgagaagatggagatggaggcaatagacaaagtagac
cagcaagttaagatggaggagggcacagaagaagattcaagccagaacaaacaggggttt
aactttggcaaatttgctaaggctggtagcagtggtggtggttttggtggtgttactaag
aaaactccgccagaacctgcaggcccaaacaggagaaccaaaagcatctacactccccta
gagcaacagtacatggagattaaggagcaatacaaggacacgatcctctgtgtggagtgt
ggctacaagtacagattctttggagaggatgcagagattgcagcaaaggagctaaacatc
ttttgtcatctggatcataacttcatgacagccagcatccctactcaccgcctctttgtc
catgtccgtcgcctcgtctctcagggctataaagttggagttgtgaagcagacagaaaca
tcagcaatcaaagcctcaagtgccaacaagagctcccttttcacccggcagttaagcgca
ctttacaccaagtctacactggttggggaagatgtgaaccccttgttgacactgggggat
ttggagcaggctgaagatgttgtgcaggacatgcccaacagctacttgatatgtgtgagt
gagaactgggacaagcagagcaaagagctgaccattggcctggtggtggtacagcccagt
acaggagatgtgatggtggactgttttggggacaatgcatctcgttctgagctggaggcc
agagttctgaagatccagcctgtagagatcctggtgccctccaacctgtccgagcctaca
gagcgcctactacgtaccatcgctctgtccagtgtccaggcagacgatcgcattcgtata
gagaagcgagaaagcactcagtttgagtatcccacggccgtgatgactgtcaaagagttc
tacagcagcacatccactcagacactggaaaatcgtgaaaaaggttctggtttgttctac
ttgagtttggagagcccggtgatctgctgccttggcccagtgatccagtatctgactgag
tttaagctggagagagttctgctgtgttccagttcatttaaaaggctgtcaaatgatgca
gaccacatggtgttcagtgccaccacaatgaagaacctagagatcttttgtaaccagacc
acaggctcagtgaagggcagtctgctctgggttctggaccatacgcacactccattcggc
aagaggctgctgaagaaatgggtcagccagcccctgaagtctgcatccgagatccgctct
cgtcaggatgcggtggctgagatcctgtcctcagagtccagcgtgttaccctccatccaa
gccctgctcactcgcctgccggacctggagaggggcctctgcagcatctaccataagaag
tgttccactcaggagttctacctcatcagcagcacgctgtcccgcttgagtacggagctt
caagccctcatccccgctctccaatcacagctcagatccgacttcttaaagagcatgcta
ctggacacgccccagctcctcagccccgcccacagcttcctgaaagtgctcaatgagaaa
gctgccaagacaggaaataagaccgagttgtttgcggacctgacagattttcccttaatc
cgagagagaaaagacgagattcaagctgttctatcggacatcatagagcatcggcgagag
cttcgcctcgtcctccgaaatccgtcactagactacgtcactgtgtctgggcaagagttc
ctcattgaggtgaagaacagcatgtcctcaattgttccaccagactgggtcaaaatcaac
agcactaagatggtgggccgctatcactccccttttattgtggagagacaccggtgtctg
ctgcagctgcgagaacagctagtcatcgattgtggccgagagtggatcaacttcctccag
ctatttggggaacattactacatcctgaggaaagcagtgggtcacctagcaaccatggac
tgtctcttctcgttggcccaggtcgcaaaagagaacaattactgcaggccggaggttctg
gagcatgaacgtcatatagcgattaaggaaggcagacacccagttatcgacatactgatg
ggcgaacaggaccagtatgtgccaaatgacactgagctccagggtgatggtaagcgagcc
atgattatcactgggcccaacatgggggggaaaagctcatacattcgtcaagttgctctg
atcaccatcatggcccaactggggtccttcgtaccagctgcagaggcatcagttggcatt
gtggatggcatatttaccaggatgggagcctctgacaacatctcaagggggaggagcacc
ttcatggaggagctgctggaggcctcagagatcctgtcccgtgccacagctcgctctctg
gtcatccttgatgaactaggcaggggtaccagcacacacgatgggatcgccattgcctat
gctaccctggagttcttcatcagagacgtgaggtgtctgaccctgtttgtgacccactac
cccccactctgtgagctggagaagctctacccacagcatgttggaaactaccacatggcc
ttcctgctcaacgaaccagagactgcagctgatgaggaggaggtgcagccagagttcatc
actttcctctatcagctgacagagggagcagcaggccggagctatgggctgaatgtggcg
cggttggccaacatccccgagagcatcctcgggaccgctgcgctcaagtccaaagagctg
gaggccatcgtgaacagccgcaggaaaactgtgaagctgctatctgaagcctggaaaatc
actaacagggaagcattgctcgagtggaaaaagttaaacctttaa

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