Colossoma macropomum (tambaqui): 118827600
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Entry
118827600 CDS
T09004
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03030
DNA replication
cmao03410
Base excision repair
cmao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118827600 (pole)
03410 Base excision repair
118827600 (pole)
03420 Nucleotide excision repair
118827600 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmao03032
]
118827600 (pole)
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118827600 (pole)
Enzymes [BR:
cmao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
118827600 (pole)
DNA replication proteins [BR:
cmao03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
118827600 (pole)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
118827600 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
CENP-B_dimeris
APP_N
Motif
Other DBs
NCBI-GeneID:
118827600
NCBI-ProteinID:
XP_036454918
LinkDB
All DBs
Position
Unknown
AA seq
2283 aa
AA seq
DB search
MVLQNSGRYRADRDGGDQDNQQDDGPGLSAVKRLERSQFTDGMDARFGFERMKEPGEKTG
WLINMHPTEILDDDKRMISAVDYYFIQEDGNRFKVALPYKPYFYIATRKNCDREVISFLS
KKFQGKVAKLDIVPKEDLDLPNHLVGLKRNYIKLSFNTVDDLIKVKREISPAVRKNRERE
KSNDAYTNMLSSALVGGGVMMADEDGTSKKIADQLDNIMDMREYDVPYHVRLSIDLKIHV
AHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEAALIQRWFEHVHETKPNIFV
TYNGDFFDWPFIEARAAQHGLSMHQEIGFQKDNQGEYKASQAIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLSYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVLDSETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTLRHAIEEEEKIPLEQVTNFNEVC
DEIKRKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGNPRAFHELNREEQARHEK
KRLGDYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAQESGDAAEMKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCHTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVIKASNEKKPKVTISYPGAMLNIM
VKEGFTNHQYQELVDPASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSK
AANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVI
SRKPEGSPVTERAIPLAIFQAEASVKKHFLRKWLKMPSLHDLDIRSILDWGYYIERLGSA
IQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVTQQKQ
DGAPDIEDFGVPQRPLQPAILISTKRKRASQGEDSQTESQELELTQSWREILGPPPPRGT
TREERLVWLRYHKKKWELQIRQRKERRKKRRLIDGEAQPTGGGVIRGGPTTGLGNFLRRT
ARSILDMPWQIVQIAETSHPGLYKLWAVIGSDLHCMKLNIPRVFYVNQRVPKQEEGATYK
KVNRILPRSNIVYYLYQYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQLG
CVCMVNKQVVRELAGREADTFDLEHLDMRSLAQFSYLEPGSVRHMYLYHHSQGHKALFGL
FIPSQRKANVFVLDTVRSNQMPNLSTMYGAERTALLEKTSEELLPPEKHLFEVRAENDVK
AIYRALQRILLSYKEERRGPTLIAVQSNWELRRLVSGMAVLEEFPVVPVHVTDEISYNVL
DWQRHGARRMIKHYLNLDSCLSQAFDMARYYHLPVGNLPEDISIFGSDLFLARHLRKHNH
LLWLSPTARPDLGGKEADDSRLVMESDERGSVEINMQGCFSTVCVELDIQSLAVNTILQS
QHVNDMEGGASLGVSFDVIQHASLEEMMSGNQGASAVASYDETALCSNTFRILKSMVVGW
VREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNMMKKLFLQLVAEFKRLGSS
VVYGNFNRIILSTKKRRIDDAIAYVEYITNSIHSREIFHSLSITFSRCWEFLLWMDPANY
GGVKGKLPSSIMYGENGMEKRKGKKEGEDEDSDDEDEEADEQEDEEQDGDEEVEDLIESN
WNIMQYLPQTASCQKYFLMIISAYIAAVYHSMKEELRRNAPGATPIKRRGGSQITQQPAG
DVSALPGMITFSQEYVSSELTQNFFTITQKIQKKVSGTRSVTLPSEMFPVLPGSHLPLNN
PSLEFIKYVCQVLSLDSNIVNQVNKLKRDLLRLVDVGEFSEEAQFHDPCNSYVLPEVICH
HCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAPYDTDSIEMALVEALQKKLMSYTLQDL
ECAKCQGVKEANMPLYCTCAGDFKLTFTIKNFTEQVTVFRNIAAHYNMHFLLETIDWILR
MNT
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcagaacagcggacgatatagagcagaccgtgatggaggagatcaggacaac
cagcaggatgatggacctggcctgtctgctgtcaagcggcttgaacgtagtcagttcaca
gatgggatggatgcgcgatttggctttgaaaggatgaaggagcctggtgaaaaaactgga
tggttgatcaacatgcatccgactgagattctggacgatgacaagaggatgatcagtgct
gtggattattacttcattcaggaggatggcaacagatttaaggttgcattaccctataag
ccgtatttctacatagccactagaaagaactgtgatcgagaagtgatctccttcttgtca
aagaagtttcaaggaaaggtggcaaagctagatatcgtccctaaggaagatctagatctg
cctaaccatttggtgggtctaaagaggaactacatcaaactctcctttaacaccgtggat
gacctcatcaaagtaaagcgagagatttcacccgcagttagaaagaacagagagagagag
aaatccaatgacgcctacaccaatatgctgtccagtgcacttgtaggtggaggtgtgatg
atggccgatgaagatggcacgtctaagaaaatagccgaccagctggacaatattatggat
atgagggagtatgatgtgccttaccatgttaggctctccatcgacctcaagatccatgtg
gctcactggtataatgtgcgctacagaggcagtgcttaccctcctgagattgtgcgtcga
gatgaccttgtagaaagaccggatccagttgtgctagcgtttgacattgagaccactaag
cttcctctgaagttccctgatgcagaaacagaccaaataatgatgatctcatacatgatt
gatgggcagggttttctgatcacaaaccgggagattgtctcagaggacattgaagatttt
gagttcactcccaaaccggagtatgaggggcccttcactgtgttcaatgaacctgatgag
gctgctcttattcagagatggtttgagcacgtccatgaaacgaaacccaatatttttgtg
acttacaacggagacttttttgactggccatttatagaggcgcgtgcagcccaacatggc
ctcagcatgcaccaagagattggctttcagaaggacaaccagggcgaatacaaagccagc
caggccattcacatggactgtctaagatgggtaaaaagagacagttacctgccagtaggt
agccataacctgaaggcagcagcaaaggccaagctgagttatgaccctgttgagttggac
ccagaggagatgtgccgtatggctactgaagaaccacagactttggctacgtactcagtg
tctgacgctgtggccacctactacctctacatgaaatacgtccatcccttcatctttgcc
ttgtgcaccatcatccccatggaaccagatgaggtgttacgtaaaggttcggggacgctg
tgtgaggcgctgttgatggtgcaggctttccatgccaacattgttttccctaataagcag
gagcaagtgtttaataaacttacagatgacggccatgttctggactctgagacctatgtt
ggtggccacgttgaggctctggagtctggagtctttcgcagtgacatcccttgccgtttc
aaaatgaatcctgcagcatttgacttcctgcttcaaagagtggagaggactcttcgtcac
gcaattgaggaagaggagaagattccactggagcaggtcacaaattttaacgaggtttgt
gatgagatcaagaggaagttgatttctctgaaggaagtgccaaacaggattgagtgtcct
cttatttaccatctagatgttggggccatgtaccccaacatcattcttaccaacagacta
cagccatctgccatggtagatgaagctacctgtgctgcatgtgattttaataagcctggc
gccaactgccagcggaggatggcctggcagtggagaggagagatcatgccggccagtcgt
agtgagttccatcgtatccagcagcagttggagtctgagaaattcccacctttgtttcct
aacgggaaccctcgtgccttccacgagctcaacagggaggagcaggctcgccacgagaag
aaacgcctgggagactactgcaggaaggcctacaagaaggtgcacttgaccaggctggag
gagagagtcaccacgatctgccagagagagaactccttctacgttgacacggtccgagcg
ttccgtgatcgacgttacgagtttaaaggactgcataaggtgtggaagaaaaagctatct
gcggctcaggagagcggtgatgcagctgaaatgaagcgctgtaagaacatggagatcctc
tatgattctctgcagctcgcacacaagtgcatccttaactctttctacggatacgtcatg
agaaaaggagcacggtggtactccatggaaatggctggtattgtgtgtcacacaggagcc
aacatcatcactcaggccagagaactgatcgagcagattgggaggcctttggagctggac
actgatggtatctggtgtgtcctccctaacaccttccctgagaactttgtcatcaaggcc
tctaatgagaagaaacccaaagtcactataagttatcctggagccatgctcaacatcatg
gtcaaggaaggtttcaccaatcatcagtaccaagaactggtagatccggcctctctgaca
tatgagacaagagcagagaacagcatcttctttgaggtagatggaccatacctggccatg
attctgcctgcctccaaagaggagggcaagaagctaaagaagaggtatgctgtctttaat
gaagatggttctctggctgagctgaaaggcttcgaagtgaagaggagaggagagctccag
ctcattaaaatctttcagtcttctgtattcgaggcttttctcaagggcaccactctggag
gaggtctatgcttctgttgctaaagtggcagactactggctagatgtgctctacagcaag
gcggctaacatgccagatgcagagctctttgagctcatctcagagaaccgatccatgtcc
cgaaagcttgaggactatggtgaacagaagtccacctctatcagcacagccaagcgactg
gctgagtttcttggtgaccagatggtgaaggacgctggcctgagctgccgctacgtcatc
tcccgaaaacctgaaggctcacctgttactgaaagggcgattcctctggccatattccag
gctgaagcaagtgtaaagaagcatttcctgcgcaaatggctcaagatgcccagccttcac
gacctggacattagatcaatcctggactggggttactacattgagaggcttggtagtgct
attcaaaagatcatcaccatcccagcagcattacaacaggtgaaaaaccctgtgcccaga
gtgcgccatccagactggttgcataagaagcttttggaaaagaatgacatctacaaacag
aagaaaatcagtgagctgttcactagtgaaggaaagagacaggtgacccaacagaagcag
gacggggctcctgatatagaagatttcggggttccacagcgccccctgcaacctgccatc
ctcatcagcacaaagaggaagcgagcatctcagggtgaggacagccaaacggagtctcag
gagctggagcttactcagtcttggagagagattctgggaccaccgccacctaggggcaca
acacgggaggagcggttggtctggctgcgctaccataagaaaaaatgggagctacagatc
cgtcagagaaaggagcgcaggaagaaacgccgcttgattgacggagaggctcagccaacc
ggaggtggagtaatcaggggcggaccaaccacagggctggggaacttcctgcgcaggaca
gccaggagcattctggacatgccttggcagattgtacagattgcagagacaagccaccca
ggcctgtataagctgtgggcagtgattggcagtgacctgcactgcatgaagctcaatatt
ccgcgagtgttctatgtcaatcaaagagtgcccaagcaagaagaaggggccacatacaaa
aaggtgaaccggattttgccacgctccaacatagtgtattacctgtaccagtactctgtg
cctgaggacatgtatcaagaacatatcaatgagatcaatgcagacctctctgccccggac
atagaaggagtctacgagacacaggtgccgctgctgttccgggcgctggtgcagctgggc
tgtgtatgtatggtaaacaagcaggtggtaagggagcttgccggccgcgaagcagatacc
ttcgacctggagcacctggacatgcggtccctcgcccagttcagctacctggagccagga
agtgtgaggcacatgtacctgtaccatcacagtcagggccacaaggctctgtttggcctc
tttatcccctctcagcgtaaagccaacgtcttcgtccttgacacggttcggagtaaccag
atgccaaacctgagtacaatgtatggagcagagcgcaccgccctcctggagaaaacctct
gaggaactgctgccacctgagaagcacctgtttgaagtgcgcgctgagaacgatgtgaag
gccatataccgtgccctgcagcgcattctgctcagctacaaggaagaacgtcgtggtcca
actctcatcgccgtgcagtctaactgggaactgcggcggctggtgtccggcatggctgtg
ctggaggagttcccagtggtcccggtgcacgtgacagatgaaattagttacaatgtgcta
gactggcagcgacacggtgcccgacgtatgatcaaacactacttaaatctggacagctgc
ctgtcacaagcctttgacatggccaggtattatcacctgcccgtggggaacctacctgag
gacatctccatttttggctcagacctatttctggcccgtcacctgcggaagcacaaccac
ctgctgtggctttctcccacagcaagacctgaccttgggggcaaggaggcagatgacagc
cgcctggtgatggagagtgatgagcgtggttctgtggagatcaacatgcagggctgcttc
tccacagtgtgtgtggagttggacattcagagcttggcagtgaacaccatcctccagtct
cagcatgtgaatgacatggagggtggggccagtctgggtgttagctttgatgtcatccag
catgcttcactggaggaaatgatgtcagggaaccagggggcaagcgctgtggccagctat
gatgagactgccctctgctccaacaccttcaggatcctgaagagtatggtggttggctgg
gtgcgggagatcacgcagtaccataatgtttatgctgataaccaggtgatgcacttctat
cgttggctgcgctcccccagctctctgctgtatgacccagcactgcaccgcacacttctc
aacatgatgaagaagctatttttgcaactggttgctgagtttaagaggcttggttcctct
gttgtctatgggaactttaaccgtatcatcctcagtaccaagaagcggcgcattgacgat
gccattgcatacgtggagtacatcaccaacagtatccattcccgggagatcttccactct
ctgtctatcacattttctcgatgctgggagttcctactgtggatggatcctgccaactat
ggaggagtcaaggggaaactgccttccagtattatgtacggagagaatggcatggaaaag
aggaaaggaaagaaggaaggagaagatgaggacagtgatgatgaggacgaagaggctgat
gaacaggaagatgaagagcaagatggggatgaagaggttgaggacctgattgaaagcaac
tggaacatcatgcagtatctgcctcagacagcttcatgtcagaaatacttcctcatgatc
atctcagcttatatagctgctgtgtatcacagcatgaaggaggagcttagacggaatgct
cctggagccacgcctataaagaggcggggtgggagccaaataacccaacaacctgctggt
gatgtcagtgcacttcctggcatgatcacattctctcaggagtatgtgtccagtgagctt
acccagaacttcttcaccatcacacaaaagattcagaagaaggtgtctggaacgcgcagc
gtgactctgccctctgaaatgttccctgtgctgcctggatcacacctgcccctcaacaat
ccgtctctggagttcatcaaatacgtctgccaggtcctctctctggattctaacattgta
aatcaagtgaataagttaaagcgagacctcctgcgtttggtggacgttggggagttttcc
gaggaagctcagttccatgacccctgcaactcttacgtcttgccagaggtcatctgccac
cactgcaacttctgtcgtgaccttgacctttgcaaggacccttccgtagcccaggatggg
tcggttttacctcagtggttctgctctaactgccaggccccgtatgacactgactcaata
gaaatggctttagtggaggctctgcagaagaaactgatgagttacaccctgcaggacctg
gagtgtgccaaatgccaaggggtgaaggaagccaacatgcccctgtactgcacctgtgct
ggagactttaaactcaccttcaccataaagaacttcacagagcaggtcaccgtgttcagg
aatatcgctgcccactacaacatgcacttcctgctagagaccatcgactggatcctgagg
atgaacacttaa
DBGET
integrated database retrieval system
