Celeribacter marinus: IMCC12053_1339
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Entry
IMCC12053_1339 CDS
T04098
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cmar
Celeribacter marinus
Pathway
cmar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IMCC12053_1339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmar03400
]
IMCC12053_1339
Enzymes [BR:
cmar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IMCC12053_1339
DNA repair and recombination proteins [BR:
cmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IMCC12053_1339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
CATASP
Motif
Other DBs
NCBI-ProteinID:
ALI55287
UniProt:
A0A0P0A9J1
LinkDB
All DBs
Position
complement(1324699..1325514)
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AA seq
271 aa
AA seq
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METHLDHIDFWDAHALLDWQVELGVSEPIGEHPVNRYDMPAAAPKPAPPASVATKGKAPP
PVRPQVETEVDGVGEAVVAAKSAGSLDALREALATFEHCALKRGAHNLVFGDGNPQARVM
VIGEAPTRDEDREGTPFVGRSGALLDKMFGAIGLDRASPDTQNGLYLVTALPWRPPENRD
ATPDEIAMLTPFLIKHIELADPDIIVIMGNLACQALTGRAGITRLRGTWEEVLGKPAMPM
THPAYLLRTPAAKREAWADLLEIQARLRTIS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggagactcatctggatcacatcgatttttgggacgcgcacgcgttgttggactggcaa
gtcgagcttggcgtgtccgagccgattggcgagcatccggtgaatcgctacgacatgccc
gcagccgcacccaaacctgcgccgccagcgtcagttgcgacaaagggcaaagcgcccccc
cccgtacgtccgcaagtcgagactgaggttgacggtgtgggagaggccgtggtggcggcg
aaatcagccggatcactggatgccttgcgtgaggcgttggcgacatttgaacattgtgcc
ctgaaacgcggcgcgcataatttggtgtttggggatggcaatcctcaggcacgggtgatg
gtcattggcgaggcacctacccgcgatgaggatcgcgagggcacgccgtttgttggccgc
tcaggggcgcttttggacaagatgttcggggcaatcggtttggatcgcgcatcgcccgat
acgcaaaacgggttgtaccttgtcacggccttgccgtggcgtccgcccgaaaaccgcgat
gcgacacctgacgagattgcgatgctaacgccgtttttgatcaagcatatcgaattggcc
gatccggatatcatcgtcattatgggcaatctggcgtgtcaggcgctcacgggccgcgcg
gggatcacgcggttgcgcgggacgtgggaagaggtgctgggtaaacccgcgatgccgatg
acgcatcccgcctatttgttgcgcacccccgcggccaagcgcgaggcgtgggccgatctt
ttggaaattcaggcgcggttgcgcactatcagctaa
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