Celeribacter marinus: IMCC12053_1758
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Entry
IMCC12053_1758 CDS
T04098
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cmar
Celeribacter marinus
Brite
KEGG Orthology (KO) [BR:
cmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmar03400
]
IMCC12053_1758
Enzymes [BR:
cmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMCC12053_1758
DNA repair and recombination proteins [BR:
cmar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
IMCC12053_1758
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DUF3638
Motif
Other DBs
NCBI-ProteinID:
ALI55705
UniProt:
A0A0P0AC81
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All DBs
Position
1722070..1725465
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AA seq
1131 aa
AA seq
DB search
MSHPDEATARQLAAARPDRSTWLAANAGSGKTKVLTDRVTRLLLEGTPPQHILCLTYTKA
AASEMQNRLFKRLGEWAMLNEADLRHEVAKLSPHTDLDDALIRHARTLFARAIETPGGLK
IQTIHSFCGGLLRRFPLEAGVSPQYRELDDRTSKEILRDVLENISDGPSQKIIDQVALYL
SEDVYALASDILSSQEKFDQPRTEQEIWAWFELAEGFDEATLLREVFLGNEPALFAQIAT
ILSSSSKSTDTDFAKECAQWASSEISTDLLKRCATKFLFGEKTKNPLCSKWGHSHGGLPT
KDMREKHADALEPLRLLMSRVEKYAPILSRLEDAKRTAILHRFARVLIPKYLAKKSFAGL
LDFDDMIRKARDLLSNSMTAQWVLFRLDGGIDHILVDEAQDTSPDQWVVVRRLAEEFASG
QGARPDVKRTIFVVGDKKQSIYSFQGADPSGFDDMRDFFDARLQAVDDPLQKLSLEHSFR
SSPAILAATDCVFGASNGYGVGGPPRHIAFFDQMPGRVDLWPLIETEAEEKRDDDWEDPL
DLTLPTHHNHKLAETIANQISKLLESGSIPAENGAFRAIQPKDILILVRRRSGLFQPLLS
KLKEKRLPVAGADLLTVGNELAVRDLCALLSFLSLEDDDLALAEALKSPLFNWSDRQLYA
LAHNRKAPNLWRELRSRKDEFPQTVAIIDDLRLKLDVLRPYDLLERVLIKHGGRRRFLAR
LGPEAEDGIDALLGQARTYETTQTPSLTGFLAWFEAEDIKIKRVLDDSSNLIRIMTTHGA
KGLESPIVILPDTLPNTKESQVRGALIDLGENRPVHLSGSVSASDITNAARATLLSKAEE
ERRRLLYVAMTRAEKWLIIAGAGAAPKNGTSWYELVQSGMAELETQALDHPLSGGLRYQV
GAWGMHPEGSLVPNDASPTLPYWAQTETSAPPKKRGYISPSELGGAKALSGEDAVLDSEK
AKRRGRQIHLLLDSLPDIDPADRKAALHHIHSDAEDAILDHEAEGLLEEAVRVLEGSYTW
AVFGSHSLSEVPFSGTLPSLNGYGVHGIIDRLIIESDRVQIVDFKTNSVLPDAAERIPEG
ILRQLGAYADAVESMYPGRFVETAVLWTKTAELMEVPRDIVRAALQRTTIS
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgagccatcctgatgaagccaccgcgcgccaattggccgcggcacgcccggatcgatca
acatggttggccgcaaatgcgggatctggaaagacaaaggttctaacagatcgggtgacc
cgccttttattagagggcacgccgccacagcacattttatgtctcacctacaccaaggcc
gcagcatctgagatgcaaaaccgtttattcaagaggctcggtgaatgggctatgttgaac
gaagcagacctgcggcatgaggtggcaaaactcagtccccatacggacctggatgatgca
cttatccgccatgcgcgcacgttgttcgcgcgcgcaatcgagacgccgggcgggctaaaa
atccaaaccattcactcgttttgtggggggcttttgcggcgtttcccacttgaggcggga
gtatcgccacagtaccgcgaactggatgaccgaacgtccaaagagatactccgagacgtt
cttgagaacatatcagacggtccgagccaaaaaattattgatcaagtcgctttgtatctt
agcgaagatgtctatgcgttggcgtcagatatattgtcgtctcaagagaagtttgatcaa
cctcgaaccgaacaagagatttgggcatggtttgaattggctgaaggttttgacgaagcc
actcttttgcgtgaagtgtttttggggaacgagccggcgctattcgctcagatcgcaacc
attttgtcgtcatcatccaaatcaacagacacagattttgcaaaagagtgcgctcaatgg
gcatcgtcagagatctctaccgatttgcttaaacgttgtgcgacaaagtttttgtttggc
gaaaaaaccaaaaaccctttgtgctccaagtggggtcattcccacggcggactaccaaca
aaggatatgcgcgagaaacacgcagacgcacttgaacccctaaggcttcttatgtcccgc
gttgaaaaatacgcccccattcttagccgtctggaagacgcgaaacggacagccatactt
catcgctttgcgcgtgttctgattcctaaatatttggcaaaaaagtcattcgccggtctg
ctcgattttgatgatatgatccgaaaagcgcgagacctgctttccaattctatgacggcg
caatgggttctctttcgtttggatggcggcattgatcatattctcgtggatgaagcacaa
gacacgtcgcctgaccaatgggttgttgttcgacggctggctgaggagtttgcatcaggt
cagggcgcgcgcccagatgtgaagcgaacaatctttgtcgttggtgacaaaaaacagtca
atttattcgttccaaggcgctgatccatcaggatttgatgatatgcgtgacttttttgat
gctcggttacaagccgtggatgacccccttcaaaagctatctctcgaacattcttttcgg
tcatctccagcaatattggcggcaacagattgtgtatttggagcctcaaacgggtacggt
gttggcggaccacctcgacacattgcgttttttgatcagatgcccggacgcgtagatttg
tggccccttatagaaaccgaagcagaagaaaaaagagacgacgattgggaagatccgtta
gatttaacactccccacacaccacaatcacaaactcgcagaaaccatcgcgaaccagata
agtaaactgctagaaagcgggtctattccagcagaaaatggtgcatttcgagcgatccaa
ccaaaagacatcttgattttggtgcggcgccgctccggactctttcagccattgttgagc
aagctaaaggaaaagcggcttcccgttgcaggagctgatctgctaacggttggaaatgag
ctggctgtgcgtgatctgtgtgctttgttgtcattcttgtcacttgaagatgacgacctt
gccttggcagaagcattgaaatcacctctattcaattggtcggaccggcaactatatgcc
ttggcgcataatagaaaagcacccaatctttggcgtgaactgagatcacgcaaagacgag
tttcctcaaaccgttgcaataattgatgatcttcgtttgaaactggatgttttgcgaccc
tatgatttgctcgaacgtgttttgatcaagcatggcggccgccgcaggtttttagcgcgg
cttgggccagaagctgaagatggaattgacgcacttcttgggcaagctcgaacatacgag
acaacgcagacgccgagtttgactgggtttttggcgtggtttgaggccgaagatatcaag
ataaagcgcgttttggacgacagctcgaatctcatacggatcatgacgacacacggtgca
aaagggctagaatctccgattgtgattttgcccgatacactgccgaatacaaaagaaagt
caggttcggggcgcgctcattgatttgggcgaaaacaggcccgtacatctttcaggttca
gtatcggcgagcgacatcacgaacgcagcgcgggcgacacttctgtccaaagccgaggaa
gagcgtcgacgccttctttatgttgctatgacgcgggcggaaaagtggctcattattgct
ggcgcgggcgcagccccaaaaaacggtacgagctggtatgaattggtccaatcaggaatg
gccgagcttgaaacccaagcgctagatcatccactttcaggcggtttgagatatcaggtg
ggcgcatggggcatgcatcctgagggttctttggtaccaaatgatgcctcaccgaccttg
ccctactgggcacaaactgaaacatccgcaccacctaaaaagcgcggttacatttcgcct
tctgagctcggcggtgccaaggcgctcagtggtgaggatgcagttttagacagcgagaag
gccaagcggcgcgggcgccaaattcatctccttctagattcgctacctgatattgatccg
gcggaccgaaaagccgcgttgcaccacatacattccgatgcagaagacgcaatattggat
catgaagcagaaggtttgctcgaggaagcagtccgcgttctggaagggagctatacttgg
gccgtgttcgggtcgcattcactgtctgaggtgcctttttcgggaacactcccatcgttg
aacggatacggcgttcacgggataattgatcgccttatcatcgaatccgatcgagttcag
atcgtcgactttaaaacaaatagcgttttgccagacgccgctgaacgcataccagagggg
atattgcgccagttgggtgcctatgcggatgcagtggaaagcatgtatcccggccgcttc
gtcgaaaccgctgttttatggacaaagacggcagagttaatggaggtgcctcgcgatatc
gtgagggcggcacttcaacgcaccactatatcttga
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