Celeribacter marinus: IMCC12053_1838
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Entry
IMCC12053_1838 CDS
T04098
Name
(GenBank) ribonuclease D related protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cmar
Celeribacter marinus
Brite
KEGG Orthology (KO) [BR:
cmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmar03016
]
IMCC12053_1838
Enzymes [BR:
cmar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IMCC12053_1838
Transfer RNA biogenesis [BR:
cmar03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IMCC12053_1838
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ALI55785
UniProt:
A0A0P0ACE5
LinkDB
All DBs
Position
complement(1805931..1806557)
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AA seq
208 aa
AA seq
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MEPIVTNFLYKNDLPDDLSLGSVVAIDCETMGLNPHRDRLCLVQLCDGNGNAHLVQIAKG
QSKAPNLCRLLEDPKTLKLFHYGRFDIAAMFHAFGALAAPVYCTKIASKLVRTYTDRHGL
KNLIDQLLKVDISKYQQMSDWGAKDLKAAQLDYAASDVLHLHSLKEKLDAMLDREGRTEI
AQNCFDFLPTRAKLDILGWQDTDIFSHQ
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggagccgattgtgacgaactttctgtacaagaacgatcttcctgatgacctcagcctt
gggtctgttgtagcaattgattgcgaaacaatgggactcaaccctcatcgcgatcggctt
tgcctcgtgcagttgtgtgacgggaacggcaacgctcatctcgttcagattgcaaaggga
caatccaaagcgccaaacttgtgtcgcctactagaggatccaaaaaccttgaagctcttt
cactacggccgctttgacattgccgcgatgttccatgcgtttggcgcgttggctgctccc
gtgtattgcaccaaaatcgcgtcaaagctggtccggacttacaccgaccgccacggctta
aaaaacctgatcgaccagcttttgaaagttgatatttccaaataccaacaaatgagcgat
tggggcgcaaaagacctaaaggccgcgcaactcgactatgcggcctctgacgtgctccac
ctgcacagcctgaaagaaaagctggacgcgatgctagaccgtgaggggcggaccgaaatc
gcacaaaattgtttcgattttcttccaacccgcgccaagctcgatattctcggatggcaa
gacacggatattttttcgcaccaatag
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