Celeribacter marinus: IMCC12053_1949
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Entry
IMCC12053_1949 CDS
T04098
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cmar
Celeribacter marinus
Brite
KEGG Orthology (KO) [BR:
cmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmar03016
]
IMCC12053_1949
Enzymes [BR:
cmar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IMCC12053_1949
Transfer RNA biogenesis [BR:
cmar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IMCC12053_1949
Prokaryotic type
IMCC12053_1949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ALI55896
UniProt:
A0A0N9ZQG0
LinkDB
All DBs
Position
complement(1905951..1906859)
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AA seq
302 aa
AA seq
DB search
MARRKKGRELHGWLIVDKPAGMTSTSVVNKVRWALNAQKAGHAGTLDPDATGVLAVALGE
ATKTVPFITDALKCYRFSVRLGQATNTDDAEGEVLSESDMRPSDDDIKAALAPFRGDIMQ
VPPKFSAVKIDGERAYKLARDEADFEIAARPLYVDMLSFIERTDDDHVLLEMVCGKGGYV
RAIARDLGAALGCFGHVEWLRREWSGPWDASDGITIEAIDEHAKTDALDAYIRPIQEGLS
DLDEVRCTPDGVIRLGHGNPGMVYPADGVEYGDEVWASFEGRPVAVGVFKSGELHPSRVF
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcccgacgcaaaaagggacgcgagctccacggttggttgatcgtggacaagcccgca
ggcatgacatctacgtctgtcgtgaacaaagttcgctgggcgctcaacgcccaaaaagca
ggccatgcaggcacgcttgaccctgatgcaacgggcgttttggccgtagctttgggggag
gctacaaagactgttcctttcattacagacgcattaaaatgctaccgtttttccgttcgt
cttggtcaagcgaccaacacggatgacgccgagggcgaagtgctcagcgaaagcgacatg
cgcccgtctgacgatgacataaaagcggccctcgcaccatttcgcggtgacatcatgcag
gtgccacccaaattttcagccgtaaaaatcgacggcgaacgcgcctacaaattggcccgc
gatgaggccgacttcgagatcgccgctcgcccgctttatgttgatatgcttagctttatt
gagcgcacagacgacgaccacgttttactcgaaatggtctgtggcaagggtggctacgtg
cgcgcaattgcgcgcgatcttggcgcggccctagggtgttttggccacgtcgaatggcta
cgccgcgagtggtccggcccatgggatgccagcgatggaatcaccattgaggccatcgat
gagcatgcaaagactgacgcgctcgacgcctatattcgtcccatacaagagggcctgtct
gatctggacgaagtgcgttgtacgcctgatggcgttatccgcttgggccatggcaatccc
ggtatggtctatccggctgacggcgtggaatatggcgacgaagtttgggcctcattcgag
ggacgccccgttgcggtcggtgttttcaaatctggcgaattgcacccctcacgtgtgttt
aacctgtaa
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