Celeribacter marinus: IMCC12053_2814
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Entry
IMCC12053_2814 CDS
T04098
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cmar
Celeribacter marinus
Pathway
cmar03030
DNA replication
cmar03430
Mismatch repair
cmar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMCC12053_2814
03430 Mismatch repair
IMCC12053_2814
03440 Homologous recombination
IMCC12053_2814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmar03032
]
IMCC12053_2814
03400 DNA repair and recombination proteins [BR:
cmar03400
]
IMCC12053_2814
Enzymes [BR:
cmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMCC12053_2814
DNA replication proteins [BR:
cmar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMCC12053_2814
DNA repair and recombination proteins [BR:
cmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMCC12053_2814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
PAS_8
SCAB-ABD
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ALI56761
UniProt:
A0A0P0ACT9
LinkDB
All DBs
Position
2753914..2756010
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AA seq
698 aa
AA seq
DB search
MNIEHWSLRLRVFLFFAFLAAAGIGAVCAGLYFGFHRLAIPQALNGFVFAGAISSFAILG
VTVWIWLMFDENVAKPIQRLSGGMLARAHANVEDELDASTARYLGDLAPAARAVTQNLSA
TRNQLAETVAQETTRLVEEKEKLSALCADIPLGVALVSGAHKLAFYNGAAAELLGADHAP
GLDHSVFDYLRDAPILSAYRRLCAGEGGDGHVIALTIATRHGAHTVSARLRLTHAPSEGD
ATPPYVLTLDDVTDDLATHVTREALLRRVVNRLRPSVAMLKTALDARASDDTLRHDARLD
GAMMSELNTLIAEFHDIDATYENAKSDWWPMGTVRGADLCDALTARLEDDGIALSADVPD
PLDLTLDAVQIISLIDHIAQHLTRDGAKALSLLITPEDTGAMIALGWSGEPLAVDRLDGW
MRSEIDVGLANMTGRAILDLHATELWPEQGRGSRAVLKLPIRDAHRRHMTAQGRRTVAYD
FDLLAKTPPKDVMDAPLSDLTYVVFDTETTGLLPSQGDEICQIAALRVVNNKIIHGEALD
RLVNPGRDIPAASTAVHHITNAMVKDAPAIGVVGKQLHSFSRGAVLVAHNAPFDLEFLRR
HEADIGAKFTNPVLDTVLLSAVVFGQSQDHTLDAICDRLGVRIAPEARHTAMGDTVATAD
VFIKMVRMAQERGINTFGEMLVQMRKHKRLLQDANDHL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgaacactggtccctgcgtctgcgcgtctttctctttttcgcattccttgcg
gcggcgggcattggcgcagtgtgcgcaggcctgtattttggctttcaccgcctcgccatc
ccccaagccctcaatggatttgtctttgctggcgcgatctctagctttgccatccttggc
gtaactgtgtggatctggctcatgtttgatgaaaacgtggccaaaccgatccaacggctt
tcagggggcatgttggcacgcgcccatgcgaacgtggaggatgaactagacgcaagtaca
gctcgctaccttggggatcttgcacccgccgctcgcgccgtgacccaaaacctgtcagcc
acacgcaaccagttggccgaaaccgtggcccaagagacaacacgtctggttgaggaaaag
gaaaaactgtctgccctatgcgcagatatcccgcttggcgtagccctcgtatcgggcgcg
cacaagctggcattctacaatggcgctgccgctgaattgctcggagccgaccacgccccg
ggcttggatcattcggtgttcgactacctgagagacgctcccatcctctccgcctaccgc
cgcctgtgcgccggcgaaggcggtgacggccacgtgatcgccctcacaattgcgacccgc
catggcgcacatactgtgtccgcacgtttgcgtctcacccacgccccgagcgagggagac
gccacgccgccctatgtgctcacccttgatgacgtcaccgacgatttggccacacatgtg
acacgagaggcgttgttgcgccgcgtggtcaatcggctccgcccgtctgtcgccatgctc
aaaaccgcgctcgacgcgcgcgcatcggatgacaccttgcgccatgacgcgcgtctggac
ggcgcgatgatgtcagagctgaacacgctcattgccgagttccacgatattgacgccacc
tacgagaacgccaaaagcgattggtggccgatgggcaccgtacggggtgctgacctgtgc
gatgctctcaccgcgcgccttgaggatgatgggatcgcgctatccgcagacgtgcccgat
ccccttgatctcacgctcgacgcggtacagattatttccctcatcgaccatatcgcgcaa
cacctcactcgtgatggggcaaaggcgctctcactcctgatcacgccagaggacaccggc
gctatgattgcgttaggatggtcgggtgagccgcttgctgtggatcgtctggatggctgg
atgcgcagcgagatcgatgtcggattggccaacatgacggggcgcgcgatccttgaccta
cacgcgaccgagctgtggccggaacaggggcgtggctcacgagcagtactcaaactgccg
atccgcgacgcgcatcgtcgccatatgaccgcacagggtcgccgcacagtggcctatgat
ttcgacctcctcgccaaaacaccgcccaaggacgtgatggacgcgccactatccgatctg
acctatgttgtgttcgacaccgaaaccacgggcctcttgccgtctcaaggtgatgagata
tgccaaattgccgccctgcgtgtcgtcaacaataagatcattcatggcgaggcccttgat
cgcttggtcaaccccggtcgcgacatccccgccgcgtctaccgccgtgcatcatatcacc
aacgcaatggtcaaagatgcccccgcaattggtgtcgtcggcaagcaactccattccttt
tcgcgcggtgcagttctggtcgctcacaacgcaccatttgatctagaattcctgcgccgt
cacgaggccgacatcggcgcaaaattcaccaatcccgttcttgataccgtgctgctgtcc
gcggtggtctttggccaaagtcaggatcatacacttgacgccatttgcgatcgtctgggc
gtgcgcatagcgcccgaagcgcgccacactgccatgggagacaccgttgccaccgcagat
gtgttcatcaaaatggtgcgcatggcgcaagaaagagggatcaatacctttggcgagatg
cttgtccagatgcgcaaacacaaacgcctgctccaagatgccaatgaccacttgtaa
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