Celeribacter marinus: IMCC12053_536
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Entry
IMCC12053_536 CDS
T04098
Name
(GenBank) l,D-transpeptidase YcbB
KO
K21470
L,D-transpeptidase YcbB
Organism
cmar
Celeribacter marinus
Brite
KEGG Orthology (KO) [BR:
cmar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmar01002
]
IMCC12053_536
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cmar01011
]
IMCC12053_536
Peptidases and inhibitors [BR:
cmar01002
]
Cysteine peptidases
Family C82
IMCC12053_536
Peptidoglycan biosynthesis and degradation proteins [BR:
cmar01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
IMCC12053_536
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ALI54485
UniProt:
A0A0N7HI81
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All DBs
Position
complement(540175..541824)
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AA seq
549 aa
AA seq
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MVLYPVLRSNVAFGALRTGKIANALRVLMALALLSTAIVPSGAAAQQVTALMQSIAEAAS
KSKDLSEFYRATGYKPVFADTSSRASSRRTALVRALRDAPAHGLAPYDTTLLEANLRSIK
SDRDLGRAEVQMAQLFLDYARDMQTGQLIPSKIDSGIVRQVPYRDAIDVLTNFTKSNPAG
YLRKLIPSSPEYARLLKEKATLEKQLGSGGWGQQVPSGKYEPGASGNGVVILRNRLISMG
YLPRSAAASYDGAMQKAVQQFQLRHGLAADGVAGDGTIREMNVEPAERLTSVLVALERER
WINMPLGKRHIRVNITDFTAKIIDNDRVTFSTRSVVGAADGDRRTPEFSDVMEHMVINPT
WNVPRSIATKEYLPLLQKNANAAGHLRVVDNRGRTVPRSAVNFNAYSASTFPFSLKQPPS
DGNALGLVKFIFPNKYNIYLHDTPAKALFGRETRAFSHGCIRLHQPFEFAYELLSKQTND
PEGLFHAHLKTGIESVVPLDDQVPVHIEYRTAIAVPNGGMEYRRDVYGRDAKIWAALQKQ
GVQLRAVGG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggttttgtatccggttctccggtccaatgtcgcgtttggcgcgttgcggacgggtaaa
attgcaaacgcactgcgtgtgctcatggcgcttgcgcttttatcaacggcgatcgtgccc
tcgggtgcggcggcgcaacaagtgacggcgttgatgcaatccatcgcggaggcggcgtca
aagtcaaaggatctgtcggaattctaccgcgcgacagggtacaagccggtgtttgccgac
acgtcatcacgggccagttcgcggcgcacggcattggtgcgcgccttgcgcgatgcgccc
gcacatgggcttgccccctatgataccacgctgttggaggccaatctgcgctcgatcaag
tcggaccgtgatctgggccgcgccgaagtgcaaatggcacagctcttcctcgattatgcc
cgcgacatgcaaacgggtcagttgatcccgtcaaagattgacagtggcattgtgcgtcag
gttccttaccgcgatgccatcgatgtgctcaccaatttcacgaagtcaaatccggcgggc
tacctgcgcaaactgatcccgtcctcacctgaatatgcgcgccttctcaaggaaaaagct
acccttgaaaaacagcttggctcgggcggttggggccaacaggtgccaagtggcaaatac
gaacccggtgcctccggaaacggcgtggttattttgcgcaaccgtttgatctccatgggc
tatttgccacggtctgcggcggcaagctatgacggtgcgatgcaaaaagcggtgcagcag
tttcagttgcgccacggtttggcggcggacggcgtggcgggggacggcactattcgcgag
atgaatgtcgaacctgctgaacgcctcacatccgtgcttgtggcgcttgagcgcgagcgg
tggatcaacatgccgcttggtaagcgtcacatccgcgtcaatatcaccgatttcacggca
aagatcattgataatgatcgcgtcacctttagcactcgctcggtcgtgggtgcggcagat
ggtgatcgccgcacacctgagttctccgatgtcatggagcatatggtgatcaacccgacg
tggaacgtgccgcgctcgattgccaccaaagaatacctgccgttgttgcaaaagaacgcc
aatgcggcgggccatttgcgggtggtggacaatcggggccggacggtgccgcgctctgct
gtcaactttaatgcctactccgcaagcactttcccgttctcgctcaagcagccgccctcg
gatgggaacgctcttggcctcgtaaagttcatatttccgaacaaatacaacatctacttg
cacgacacgcccgcaaaggcactgttcgggcgcgagacgcgtgcgtttagccacggctgt
atccgtctgcatcagccgttcgaatttgcctatgagctgttgtcaaagcaaaccaatgat
cctgagggattgtttcatgcgcatctgaaaacgggcatcgaaagtgttgttcccttggac
gatcaggtgccggtgcatatcgaataccgcacggcgattgcggtgccaaatggcgggatg
gaataccgccgtgatgtgtatggacgcgatgccaaaatctgggcggcgcttcaaaaacag
ggcgttcagttgcgcgctgtcggcggctga
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