Celeribacter marinus: IMCC12053_589
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Entry
IMCC12053_589 CDS
T04098
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
cmar
Celeribacter marinus
Pathway
cmar02024
Quorum sensing
cmar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IMCC12053_589
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IMCC12053_589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmar03019
]
IMCC12053_589
03036 Chromosome and associated proteins [BR:
cmar03036
]
IMCC12053_589
Messenger RNA biogenesis [BR:
cmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IMCC12053_589
Chromosome and associated proteins [BR:
cmar03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
IMCC12053_589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
AcMNPV_AC11
Motif
Other DBs
NCBI-ProteinID:
ALI54537
UniProt:
A0A0P0A2P5
LinkDB
All DBs
Position
complement(589573..589812)
Genome browser
AA seq
79 aa
AA seq
DB search
MAGDKQNLQDAFLNHVRKTKVPVTIFLINGVKLQGVITWFDNFCVLLRRDGQSQLVYKHA
ISTIMPAQPISLYDGEDAQ
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgacaaacaaaatctccaagacgcgttcctcaatcacgttcgcaaaaccaaa
gttccagtgacgatctttttgatcaatggtgtgaagttgcaaggcgtcatcacatggttt
gataacttttgtgttttgctgcgccgcgatggtcagtcgcaacttgtatacaagcacgcg
atttccacgattatgcccgcacagcctatcagcctttatgacggtgaagacgcgcagtaa
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