Celeribacter marinus: IMCC12053_841
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Entry
IMCC12053_841 CDS
T04098
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cmar
Celeribacter marinus
Pathway
cmar03420
Nucleotide excision repair
cmar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IMCC12053_841
03430 Mismatch repair
IMCC12053_841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmar03400
]
IMCC12053_841
Enzymes [BR:
cmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMCC12053_841
DNA repair and recombination proteins [BR:
cmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IMCC12053_841
MMR (mismatch excision repair)
Other MMR factors
IMCC12053_841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
CarD_TRCF_RID
DUF3553
Motif
Other DBs
NCBI-ProteinID:
ALI54789
UniProt:
A0A0N7HIB9
LinkDB
All DBs
Position
complement(847262..849880)
Genome browser
AA seq
872 aa
AA seq
DB search
MSSFSEDDAFEAAAPPANRPSLSQMAMGARPTPYLEGLNPAQREAVEAMDGPVLMLAGAG
TGKTKALTCRIAHLLNTGRARPNEILAVTFTNKAAREMKDRVGAHMGQSVDGVRWLGTFH
AICVKQLRRHAELVGLKSNFTILDTDDQIRLLKQLIRAAGMDDKRWPARQLAGLIDGWKN
KALTPAKLGAADEAAFDDRGKALYAQYQHRLKELNACDFGDLLLHMVTIFQNHPDLLEQY
QRWYKYILVDEYQDTNVAQYMWLRLLAQGHRNICCVGDDDQSIYGWRGAEVGNILRFEKD
FPGATVVRLEQNYRSTPHILAAASSVIAANSGRLGKDLWTAEQDGEKVRLIGHWDGEEEA
RWVGEEIEAMHSGTRARLRKFSLDDQAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYE
RLEIRDAMAYFRVVISPEDDLAFERIINVPKRGVGDKAMTDIQVTARTNGVSLKEGARIA
AQDGLLKGKAKSGVAQLIAQLDLWRYLYSNRGNEDVISDYDAEISELASKLGVVEAELAL
MTSKGMNVKEDCAELLLLAEQLKSQIKVLQSYVEYLRSDNDVVLAEIILDESGYTTMWQN
DKNPDSPGRLENLKELVKALDAFDNLGGFLEHVALIMDNSNEEHGEKVTIMTLHGAKGLE
FPVVFLPGWEEGLFPSQRSMDESGQQGLEEERRLAYVGITRAEEVCTISFAGNRRVYGQW
QSQLPSRFIDELPQDHVDILTPPGLYGGGYGAAQSGGFSSEASGAGMSAAFETRVEKADV
YNSPGWKRLQQRSQRSGAATNVRSGKGGHMTIDAKAALVFTVGDRVFHQKFGYGQVLEIE
GDKLAIDFDHSGEKKLVASFVTPAEKAGDVPF
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtttcagtgaagatgatgcctttgaggccgcagccccacccgcgaaccgaccc
tctttgagccaaatggcgatgggggcgcggccaacgccgtatcttgagggattgaacccc
gcacagcgcgaggccgtcgaggcgatggatgggcccgtcttgatgcttgcgggcgcgggc
acgggcaaaaccaaagcgctgacctgtcgcattgcgcatctgctcaacacggggcgcgcg
cgtcccaacgaaatcctcgccgtcacctttaccaataaggcggcccgcgagatgaaggac
cgcgtgggcgcgcacatggggcaatctgttgacggggtgcgttggctcggtacgtttcac
gcgatctgcgttaaacagttgcgccgccacgccgaattggtcggcctaaaaagcaatttc
acgattttggacactgacgatcaaatccgtctgctcaaacagttgatccgtgccgcaggg
atggacgacaaacggtggcctgcgcgtcagcttgcgggattgatcgacgggtggaagaac
aaggcgctaacgcccgccaaattaggcgcggcggatgaggcggcattcgatgatcggggt
aaggcgctttatgcgcagtaccagcaccgtctcaaagagttgaacgcttgcgattttggc
gatttgttgctgcatatggtcacgatttttcaaaatcatcccgacctgttggagcagtat
cagcggtggtacaaatatatcctcgtggacgagtatcaggacacgaacgtggcacagtac
atgtggctacgattgttggcgcaggggcatcgcaatatctgttgtgtcggcgatgatgat
cagtcgatctacgggtggcgcggggccgaagttggcaatatcttgcggtttgaaaaggat
tttccgggggctacggttgtacgcctagagcaaaactatcgctcgaccccccacatcctc
gccgcggcgtcgagcgtgattgccgccaattcgggtcgtttgggcaaagacctttggacg
gctgagcaagacggtgaaaaggtgcgcttgatcggtcattgggatggcgaagaagaggcg
cgttgggtcggcgaagagatcgaagcgatgcacagtggcacgcgggcgcggttgcgcaaa
ttctctctcgatgatcaggcgattcttgtgcgggcctcacatcagatgcgggcgtttgaa
gatcggttcttgaccatcggattgccataccgtgtgatcggcggcccacggttctacgag
cgcttggaaatccgtgacgctatggcctattttcgcgtggttatctcgcccgaagatgat
ctggcgtttgagcgcataatcaacgtgcccaagcggggcgtgggtgataaggcgatgacc
gatattcaggtcaccgcgcgcaccaacggcgtctcgctcaaagagggcgcgcggattgcg
gcgcaagatggtttgctcaaaggcaaagccaaatcgggcgtggcgcagctgattgcccag
ttggacctgtggagatacctgtattcaaatcgggggaatgaggatgtgatttccgactat
gacgctgagatttcggaactcgcttccaagttgggagtcgtagaggctgagctggctctt
atgacaagtaaagggatgaatgttaaggaagattgtgctgagttgcttctattggcagag
caactcaaatcacaaatcaaagtactgcaatcttatgtagagtatttgagatctgataat
gacgttgtcttagccgaaatcattctcgacgagagcggctacaccacgatgtggcaaaac
gacaaaaacccagattctccgggccgtcttgaaaacctcaaggaactcgtcaaggctctg
gacgcctttgataaccttggtggatttctcgaacacgttgccctgatcatggacaacagc
aacgaggaacacggcgaaaaagtcaccatcatgacgctgcacggcgccaaggggcttgag
tttcccgtggtgtttttacctgggtgggaggaggggttgttcccctctcagcgctctatg
gacgaaagtggtcaacagggtctcgaagaggagcggcgtctggcctatgtgggcataacg
cgggcggaggaagtttgtacaatttcgtttgcgggcaatcgccgcgtttatggccaatgg
caaagccaactgccctcgcgctttatcgatgaacttccccaagatcacgttgatattctc
accccgcccggcctgtacggcggtggatatggcgcggcgcaatcggggggcttttctagt
gaggcctcaggcgcaggaatgtcagccgcctttgagacccgcgtcgaaaaggcagatgtc
tataattccccagggtggaagcgcttgcaacagcgtagccaacgaagcggggcagccacc
aatgtgcgctctggtaagggcggccatatgacgattgatgcgaaagcggcgctggtcttt
acggttggggaccgcgtgtttcaccaaaagttcggctatggtcaggtgttggagatcgag
ggcgacaagcttgcgattgattttgaccattcgggcgagaaaaaactcgtggccagcttc
gtgacgcctgctgaaaaggctggcgacgtcccattttga
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