| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
cmas Corynebacterium massiliense
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cmas00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CMASS_01575 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cmas03021]
CMASS_01575 (rpoC)
03400 DNA repair and recombination proteins [BR:cmas03400]
CMASS_01575 (rpoC)
Enzymes [BR:cmas01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CMASS_01575 (rpoC)
Transcription machinery [BR:cmas03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CMASS_01575 (rpoC)
DNA repair and recombination proteins [BR:cmas03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CMASS_01575 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
323983..327999
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| AA seq |
1338 aa
MKGRIYVFDVNLFDELRIGLATAEDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGP
TRDWECACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRL
GYLLDLAPKDLERIIYFAANIVTSVDEEARHNDQSTLEAEMLLEKKDVEDDTNSEIEERA
SKLEQDLAELEESGAKADARNKVKRAAEKEMQQIRERGEREVERLDEIWNTFLKLEPKQM
IIDETIYEELVDRYEDYFTGGMGAEALQTLIRNFDLESEAEELREVINNGKGQKKMRALK
RLKVVAAFLRSGNDPAGMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRL
KRMIDLGAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFR
QNLLGKRVDYSGRSVIITGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKR
MVERQRSEVWDVLEEAISEHPVLLNRAPTLHRLGIQAFEPILVEGKAIQLHPLACEAFNA
DFDGDQMAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTMDKSE
DEIGGEGRYQEATEDRPAQGIYSSYAEAIMARDRGVLGLQAPIQVRISHLRPPKDVEAEQ
FPDGWERGQEWTARTTLGRIMFNELLPWNYPYLEGIMVRKGGGDGKVLIGDVINDLAVKY
PMITVAQVLDNMKDAGFYWATRSGVTITMSDVLVLPNKTEILESYEKEAERIERKYWDQG
ALTERERYDRLVELWKDATDTVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGM
VVNSKGDYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQD
VIVREEDCGTRQGVRVPIAEEVSEGKFQVHDLWETSASGRVVASDVKDGEGNVVAEAGAE
LSDELTDKLIAAGVTEIKVRSVLTCQTPAGVCAKCYGKSMASGQLVDIGEAVGIVAAQSI
GEPGTQLTMRTFHQGGVGGDITGGLPRVQELFEARNPKNRAPIASVAGTVSLSDEGNFWT
LTITPDDGSDNVVYEKLSKRQGLAQVRRPMESNPDAMIERSLRDGDHVEVGERLMRGAAD
PHDVLEVLGRRGVEKHLIDEVQAVYRTQGVAIHDKHIEIIIRQMLRRGTVIEAGSTEFLP
GSLVDLSEAKQINAAQVAEGGEPAQLRSEIMGITKASLATESWLSAASFQETTRVLTDAA
INKRSDKLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNSAYSIPTYGDSIYGDEG
FGEYTGASVPLDEDFTLN |
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| NT seq |
4017 nt +upstreamnt +downstreamnt
atgaaagggagaatttacgtgttcgacgtaaacctctttgacgagctccgcatcggcctt
gccaccgccgaagacatccgccggtggtccaagggcgaggtcaagaagcctgagaccatc
aactaccgcaccctcaagccggagaaggacggcctgttctgcgagcgcatcttcggcccg
acccgtgactgggagtgcgcctgcggcaagtacaagcgcgtgcgctacaagggcatcatc
tgtgagcgctgcggtgtcgaggtgaccaagtccaaggtgcgccgtgagcgcatgggccac
atcgagctggccgccccggtcacccacatctggtacttcaagggcgtcccgtcccgtctg
ggctacctgctggatctcgccccgaaggacctcgagcgcatcatctacttcgcggcgaac
atcgtcacgtccgtcgacgaagaggcgcgccacaacgaccagtccactctggaagcagag
atgctgctggagaagaaggacgtcgaggacgacaccaactccgagatcgaagagcgggcg
tccaagctcgagcaggatctcgcggagctggaagagtccggcgccaaggcggacgcacgc
aacaaggtcaagcgtgccgctgagaaggagatgcagcagatccgcgagcgcggcgagcgc
gaggtcgagcgcctcgacgagatctggaacaccttcctcaagctcgagccgaagcagatg
atcatcgacgagaccatctacgaagagctcgtcgaccgctacgaggactacttcaccggc
ggcatgggcgccgaagccctgcagacgctgatccgcaacttcgacctcgagtccgaggcc
gaggagctgcgcgaggtcatcaacaacggcaagggccagaagaagatgcgcgcgctcaag
cgcctcaaggtcgtcgctgccttcctgcgttccggcaacgacccggccggcatggtcctg
gatgcgatcccggtgatcccgccggagctgcgcccgatggtgcagctcgatggtggccgt
ttcgccacctcggatctcaatgacctgtaccgccgcgtgatcaaccgcaacaaccgcctg
aagcgcatgatcgatctcggcgcgccggagatcatcgtcaacaacgagaagcgcatgctg
caggagtcggtggacgcgctgttcgacaacggccgccgcggccgtccggtcaccggcccg
ggcaaccgtccgctgaagtccctgtctgacctcctcaagggcaagcagggccgcttccgc
cagaacctgctgggtaagcgtgtggactactccggccgttcggtcattattaccggcccg
cagctcaagctgcacgagtgcggtctgccgaagctcatggcgctcgagctgttcaagccg
ttcgtcatgaagcgcctggtggaaaacgactacgcgcagaacatcaagtccgccaagcgc
atggtcgagcgccagcgctccgaggtgtgggacgttctggaagaggcaatttcggagcac
ccggttctgctgaaccgtgcgccgaccctgcaccgtctgggcatccaggccttcgagccg
atcctggtcgagggtaaggccatccagctgcacccgctggcgtgtgaggcgttcaacgcc
gacttcgacggtgaccagatggctgttcacctcccgctgtcggcggaggcgcaggccgag
gcacgcgtgctcatgctcgcgtccaacaacatcctgtccccggcgtccggtaagccgctg
gctatgccgcgtctggacatggtgaccggcctgtactacctcaccatggacaagtccgag
gacgagatcggcggcgaaggtcgctaccaggaggccaccgaggaccgtccggcgcagggc
atttactcgtcctacgctgaggcgattatggcgcgcgaccgcggcgtactgggcctgcag
gccccgatccaggtccgcatctcccacctgcgtccgccgaaggatgtcgaggcggagcag
ttccccgacggctgggagcgcggccaggagtggaccgcgcgcaccacgctcggccgcatc
atgttcaacgagctgctgccgtggaactacccgtacctcgagggcataatggtccgtaag
ggcggcggcgacggcaaggtgctcatcggtgacgtcatcaacgacctggcggtcaagtac
ccgatgatcaccgtggcccaggtgctggacaacatgaaggacgccggcttctactgggct
acccgctcgggcgtgaccatcaccatgtcggacgttctggtcctgccgaacaagacggag
atcctcgagtcttacgagaaggaagccgagcgcatcgagcgcaagtactgggaccagggt
gccctgaccgagcgcgagcgctacgaccgcctggttgagctgtggaaggacgccacggac
accgtgggtcaggccgtggaggacctctacccggacgacaacccgattccgatgattgtg
aagtccggtgctgccggtaacatgcgtcagatctggacgctggccggcatgaagggcatg
gtcgtgaactccaagggtgactacatcacccgtccgattaagacctccttccgcgaaggt
ctgtcggtgttggagtacttcaacaactcgcacggttcccgcaagggcctggccgatacc
gcgctgcgtaccgccgactcgggttacctcacccgtcgtctggtcgacgtcgcccaggac
gtcatcgtccgcgaagaggactgtggcacccgccagggtgtgcgcgtcccgatcgcggag
gaggtctccgagggcaagttccaggtccacgatctgtgggagacttcggcttccggccgc
gttgtggcctccgacgtcaaggacggcgagggcaacgtggttgccgaggccggcgcggag
ctgagcgatgagctgaccgacaagctcatcgcggctggcgtcaccgaaatcaaggtccgc
tccgtgctgacctgccagaccccggccggtgtctgcgcgaagtgctacggcaagtccatg
gcctctggccagctggtggacatcggcgaggctgtcggcatcgtcgccgcccagtccatt
ggtgagccgggtacccagctgaccatgcgtacgttccaccagggtggtgtcggtggcgac
attactggtggtctgccgcgtgtccaggaactcttcgaggcccgtaacccgaagaaccgc
gccccgatcgcgtccgtggcgggtaccgtctcgctgtcggacgagggcaacttctggacc
ctgaccattaccccggacgacggttcagacaacgtggtctacgagaagctgtccaagcgg
cagggcctggctcaggtgcgccgcccgatggagtccaacccggacgccatgatcgagcgt
tccctgcgcgacggcgaccacgtcgaggtgggcgagcgcctcatgcgcggcgctgcggat
ccgcacgacgtgctcgaggtccttggccgtcgtggtgtggaaaagcacctcatcgacgag
gttcaggccgtctaccgcacccagggtgtggccattcacgacaagcacatcgagatcatc
atccgtcagatgctgcgtcgtggcacggtcatcgaggcgggctccacggagttcctgccg
ggctccctggtggacctgtccgaggcgaagcagatcaacgccgcgcaggtcgccgagggc
ggcgagccggcacagctgcgctcggagatcatgggtattaccaaggcgtccctggctacc
gagtcctggctgtccgcggcctccttccaggagaccacccgcgttcttaccgatgccgcc
atcaacaagcgctccgataagctcatcggcctgaaggagaacgtcatcatcggtaagctc
atcccggctggtacgggtatctcgcggtaccgcaacatctcggtcaagccgaccgaggcg
gcgcgcaactccgcgtactccatcccgacctacggggattccatctatggcgacgagggc
ttcggtgagtacaccggtgcctccgttccgctggatgaggacttcaccctcaactaa |
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