Corynebacterium massiliense: CMASS_01855
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Entry
CMASS_01855 CDS
T08886
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cmas
Corynebacterium massiliense
Pathway
cmas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CMASS_01855 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmas03021
]
CMASS_01855 (rpoA)
03400 DNA repair and recombination proteins [BR:
cmas03400
]
CMASS_01855 (rpoA)
Enzymes [BR:
cmas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CMASS_01855 (rpoA)
Transcription machinery [BR:
cmas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CMASS_01855 (rpoA)
DNA repair and recombination proteins [BR:
cmas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CMASS_01855 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
WCZ31830
LinkDB
All DBs
Position
367861..368871
Genome browser
AA seq
336 aa
AA seq
DB search
MLISQRPQLTEEPIDSSRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVL
HEFTTINGVKEDVSEIILNIKNLVLSSDSDEPVVMYLEKEGPGDVTAGDIQPPAGVEIHN
PDLHLASLNDTAQLNIEFVVERGRGYVPAAATSGEIGRIPVDQIYSPVLKVSYKVDATRV
GQRTDFDKLTIDVETKNSISARDAMASAGGTLVELFGLARELNDQAEGIEIGPSPQETEY
IAAYSMPIEDLDFSVRSYNCLKRQEIHTVGELAECTESDLLDIRNFGQKSINEVKIKLAN
LGLTLKDAPEDFDPSQLEGYDEETGDFKDPAAEDSE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttcccagcgccctcagctcaccgaggagcccatcgattcttcgcgctcaaag
ttcgtcattgaaccgctcgagccgggcttcggttacaccctcggtaactccctgcgccgc
acgctgctgtcgtccatcccgggcgccgcagtgacctcgatcaagatcgacggcgtgctg
cacgagttcacgaccatcaacggtgtgaaggaagatgtctccgagatcatcctgaacatc
aagaacctcgtcctgtcgtctgactccgacgagccggtggtcatgtacctggaaaaggag
ggcccgggcgatgtcaccgcgggcgacatccagccgccggccggcgtggagatccacaac
ccggatttgcacctggctagcctgaatgacaccgcgcagctcaacatcgagttcgtcgtc
gagcgcggccgtggctacgtcccggctgccgctacctccggcgagatcggccgcatcccg
gtcgatcagatttactccccggtgttgaaggtttcctacaaggtcgacgccacccgtgtg
ggccagcgcaccgactttgacaagctgaccatcgacgtggagaccaagaactccatctcg
gctcgggacgctatggcttcggccggcggcaccttggtcgagctcttcggcttggcccgt
gagctcaacgaccaggccgagggcatcgagatcggcccgtcgccgcaggaaaccgagtac
atcgcggcatacagcatgccgattgaggatctggacttctccgtgcggtcctacaactgc
ctgaagcgccaggaaatccacaccgtcggtgagctcgccgagtgcaccgagtcggacctg
ctggatatccgcaacttcggtcagaagtcgatcaacgaggtgaagatcaagctggccaac
ctggggctgaccctgaaggacgctccggaggacttcgatccgagccagctcgaaggctac
gacgaggaaaccggtgactttaaggatccggccgccgaggattccgagtaa
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