Corynebacterium massiliense: CMASS_02800
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Entry
CMASS_02800 CDS
T08886
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cmas
Corynebacterium massiliense
Pathway
cmas03420
Nucleotide excision repair
cmas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CMASS_02800 (uvrD2)
03430 Mismatch repair
CMASS_02800 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmas03400
]
CMASS_02800 (uvrD2)
Enzymes [BR:
cmas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMASS_02800 (uvrD2)
DNA repair and recombination proteins [BR:
cmas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMASS_02800 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
CMASS_02800 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
UCH_C
NPH3
Motif
Other DBs
NCBI-ProteinID:
WCZ32019
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All DBs
Position
583378..586686
Genome browser
AA seq
1102 aa
AA seq
DB search
MANAHFASSHTPEEIAKALGKHQPTPEQAGVISAGSGPLLVTAGAGAGKTETMASRVVYL
VANGMVKPDEVLGLTFTRKAAGQLEQRIRRNLIDLRGSGLIEPRGEIGEALTTIAPKAMT
YDSFVGELVREFGLLAPVEPFARLITAAEEYAIAHELVSNYTGKVGVDKQVASVTEDILA
LAGNMTNRLYDVDTVRDLSTEFLRAAEELPPATKKTEYSKKLLTKMDAQRGRINYLPLVV
ELARTYRDKQVTTFGEQMAVAARLVVEHPGIGKQLRNRYKVVMLDEYQDTSHAQRVFLRT
LFGHAEGAAEGDEPTTVTAVGDPMQSIYGWRGASEENLSSFATDFPAADGSPAPKKELTT
SWRNPRLVLDMANTVADVVLADGNASRLVGPLQPRSDAEAGDVQLGYFATSEAECRFVAE
HMRDKYLASREAGKELSAAILVRKNSHSVEIAHYLDELDVPYEIVGLGGLLSEPEIQDLL
AVATMLIRPQDNSAALRVLSGPMCGIGMRDITALGERARNLAGRLAGEDVGGEEPADQNL
SAADDGTILGWLRREVAERTPEAPEQAVGLTDAVADLGERDRYTAEGLQRLEELSSTLRA
LRSYSLSKPLIDLFADIERAFNVRTEALARGGAAGTAHLDQFADVVATFPGSGLAAWLDY
CAMAREREDGLQPGEVPAADDRVLIMTTHKAKGLEWEHVSVLHADSQTYSGKANSYVTRS
TELPSADDYLDAEAFAGDKEPTRTHFDRAGEAKKQESKHANELEAARLFYVALTRTESTL
TVTGGGTDGSNGKAKKGPYEFLHQLAEKFPDHVVCWNDPNDPQDSDDQDEQGDAATSPES
GAFPYLAPDAAALAAADKVRAALDSLPDQVAGERFQQWETEASALIEEHRGLMAPEVEVA
VPTELTASDVVALRGDPTQFARRQRRPVPFKPNAYAKRGTAFHSWLEEYFGGSALLSEEE
LPGLDEELGLEDLAALKDSFQASQWAQRTPVEVEAPFEITVDGAVVRGRMDAVFRDPDGT
WVVVDWKTGRPPQGEDMRAAEQQLAVYREAWRRIRQRAGEESPQVKALFHYVTDGFDFEP
RHLGGADELAGVLRQAVRRVEY
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgcacacttcgcctcatctcatacgccggaagaaatagccaaggcactggga
aaacaccagcccaccccggagcaggcgggcgttatctccgccggttctgggccacttcta
gtcaccgccggcgccggagccggcaagacggaaacgatggccagccgcgtggtctatttg
gtcgcgaacgggatggtgaaacccgacgaggtgttggggctgaccttcacccgcaaagca
gccgggcagctcgagcagcgcatccgccgcaacctcatcgacctgcgcggctccgggttg
attgaaccccgcggggaaatcggcgaggcgctgaccaccatcgccccgaaggcaatgacg
tacgactctttcgtcggcgagcttgtccgcgagttcgggctgctggcccctgtcgaaccg
ttcgcgcgccttattaccgccgcggaggaatacgccatcgcccacgagctggtgagcaac
tacaccggtaaggtcggcgtggacaagcaggtggccagcgtcaccgaagacatcctcgcg
ctggcggggaacatgaccaaccgtctctacgacgtggacacggtccgcgacttgtccacc
gagttcctccgcgccgcagaggaactgccgccggcaacgaaaaagacggagtactcgaag
aagctgctgaccaaaatggacgcgcagcgcgggcgcatcaactacctcccgctggtggtg
gaacttgcccgcacctaccgcgacaagcaggtcaccacgttcggcgagcagatggccgtg
gcggcgcggctggtggtggagcacccgggcatcggcaagcagctgcgcaaccgctacaag
gtggtcatgctcgacgaataccaggacacctcccatgcgcagcgcgtgttcctgcgcacc
ctgttcgggcatgccgagggagcggccgaaggggacgagcccaccaccgtcacggcggtg
ggcgatcccatgcagtccatctacgggtggcgcggcgccagcgaggagaacctctcgagt
ttcgccaccgatttcccggctgccgatggctcgccagcgccgaagaaggagctgaccacc
tcgtggcgcaacccgcgcctggtgctcgatatggcgaacaccgtcgcggacgtggtcctg
gccgacggcaacgcgagccggctcgtcggcccgctgcagccgcgctcggatgcggaggcc
ggcgacgttcagctcgggtacttcgccacgtccgaggccgaatgccgtttcgtggccgag
cacatgcgcgacaagtacctcgccagccgcgaggccggcaaggaattgagcgccgccatc
ttggtccggaaaaacagccactcggtagaaatcgcccactacctcgacgagcttgacgtc
ccgtacgagatcgtcggcctgggcgggcttttatcggagccggaaatccaggacttgctc
gcggtggcgaccatgctcatccgcccgcaggacaacagtgccgcgctgcgcgtgctgtcc
gggccgatgtgcggcatcggcatgcgcgatatcaccgccttgggcgagcgcgcccgcaac
ctcgccggccggttggcgggcgaagatgtcggcggcgaagaacccgcggaccagaatctt
tctgctgcagacgacggcaccatcctgggctggctgcgccgggaggtcgccgagcgcacc
ccggaggcgcctgaacaggcggtggggctcacggatgcggtggctgacctgggcgagcgt
gaccgctacaccgcggaagggctgcagcgcctggaggagctgtccagtacgctgcgcgcg
ctgcgctcgtactcactgtccaagccactcatcgatcttttcgccgatatcgagcgcgca
ttcaatgtccgcacggaggcgctcgcgcgcggcggggcagccggaacggcacacctcgat
cagttcgccgacgtggtcgcgaccttccccggaagcggcctggccgcgtggctcgactac
tgcgcaatggcgcgtgagcgcgaggacggcctccagcccggggaggtaccagccgccgac
gaccgcgtgctcatcatgactacgcacaaggccaagggcctggagtgggagcacgtcagc
gtgctgcacgccgattcccagacctattccggcaaggcgaactcgtacgtcacgcgctcg
accgagctacccagcgcggacgactacctcgacgccgaggccttcgcgggggacaaggag
ccgacccgcacgcactttgacagggcgggcgaggcgaagaagcaagagagcaagcacgcc
aacgaactggaggccgcgcgcctgttctacgtcgcgctgacgcgcaccgagtccacgctg
accgtcaccggcggcgggacggacggttcgaacggcaaggcgaagaaggggccgtacgag
ttcctgcatcagctcgccgagaagttcccggaccacgtcgtgtgctggaacgacccgaac
gacccacaggactcggacgatcaggatgaacagggcgacgccgcgaccagcccggagagc
ggcgcattcccgtaccttgcgcccgatgcagcggcgctcgcggccgcggacaaggtgcgc
gccgcactcgacagcctgcccgaccaggtcgccggggagcggttccagcagtgggagacc
gaagcatccgcgctcatcgaggagcaccgcgggctcatggccccggaggtggaggtcgcc
gtgcccacggaactgaccgcctccgacgtggtggcgctgcgcggcgacccgacgcagttt
gcccgccgccagcgccggcccgtgccgttcaaaccgaacgcctacgctaagcgcggcacc
gccttccactcctggctggaggagtacttcggcggcagcgcgttgctgagcgaggaggaa
cttccgggcctggacgaggagctcggtctggaagacctggcggcgctcaaggactctttc
caggccagccagtgggcgcagcgcacgccggtcgaggtggaggcccccttcgagatcacg
gtggatggtgccgtggtgcgcgggcgtatggacgcggtctttcgggacccagacggcacc
tgggtggtggtggactggaagaccggccggccgccacagggcgaagacatgcgcgccgcc
gagcagcagctggcggtctaccgcgaagcttggcggcgcatccgccagcgcgccggggaa
gaatccccccaggtcaaagccctgttccactacgtgaccgacggcttcgacttcgagccg
cgccacctgggtggggctgacgaactcgcgggcgttctccggcaggcggtgcgccgcgta
gagtattag
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