Corynebacterium massiliense: CMASS_03215
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Entry
CMASS_03215 CDS
T08886
Symbol
uvrD4
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cmas
Corynebacterium massiliense
Pathway
cmas03420
Nucleotide excision repair
cmas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CMASS_03215 (uvrD4)
03430 Mismatch repair
CMASS_03215 (uvrD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmas03400
]
CMASS_03215 (uvrD4)
Enzymes [BR:
cmas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMASS_03215 (uvrD4)
DNA repair and recombination proteins [BR:
cmas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMASS_03215 (uvrD4)
MMR (mismatch excision repair)
Other MMR factors
CMASS_03215 (uvrD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
ResIII
DEAD
AAA_11
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WCZ32097
LinkDB
All DBs
Position
672839..675388
Genome browser
AA seq
849 aa
AA seq
DB search
MTNSPFSSPFSSRDSDNPQGQPSLFGGGDGSAQPARETANTPEPLTTGLNEQQAAAVEHT
GAPLLIVAGAGSGKTAVLTRRIAHLLRNRGVSPWQVLAITFTNKAAAEMKDRVGQLVGPV
AERMWVSTFHSFCVRILRQQAQLVPGLNSKFTIYDGDDARRLLGMIAKEKQIDLKKFTPR
VLANQISNYKNELIGPDAAAHRASETRNPFDRTVADVYADYQKRLRAANAVDFDDLIGEV
VRIFADYPQVTEFYRKRFRHVLIDEYQDTNHAQYRLVSELVGRGNLGPDAPELCVVGDSD
QSIYAFRGATIRNIQEFERDYPQARTILLEQNYRSTQTILDAANAVIARNENRREKNLWT
AKGSGDQIVGYVADNEHDEARFIATEIDALADKGKPYSDIAVMYRTNNASRALEDIFIRT
GIPYRVVGGTRFYERREIRDIVAYLRILDNPDDTVSLRRIINVPKRAIGDKAQGHIAVHA
DNLGVSFGRALVDAAAGDVPGLGTRAVNAVRKFNEMMQGIANQVPDMRNSVTGQPDLGEL
INAVLDATGYRAELENSNDPQDGSRLDNLNELVSVAREFSSEAANQLAASDIDPAEAVEE
GEAAPGSLQAFLEKVSLVADADQIPDSENGVVTLMTLHTAKGLEFPVVFLTGWEDGQFPH
MRALGDPKELSEERRLAYVGITRAREKLYLSRAIIRSSWGNPLTNPASRFLGEIPEDLLS
WRREEPDSSLSGSGWDEPSYSYGRTFGSSWSGWGGKSRSSRSGARSGSTASSPTQRGRNR
GSRSGGGGAGMKNSNLQLAVGDRVNHAKYGLGTVVDCSGSGARATATIDFGSAGTVRLML
IGGLPMEKL
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgacgaactcgccttttagcagcccattttcttcccgtgatagcgacaacccccaaggc
cagccgtcccttttcggcggcggtgacggaagcgcccagcccgcgcgcgagacagcgaat
accccggagccgctgacgacggggctcaacgagcagcaggccgcggcggtggaacatacc
ggcgcgccgctgctgattgtcgccggcgcgggttccggaaagaccgcggtgcttacccgg
cgcattgcccacctgttgcgcaaccgcggggtctcgccgtggcaggtgctggccattacc
tttaccaacaaggctgccgcggagatgaaagaccgcgtcggccagctcgtcggcccagtc
gcggagcggatgtgggtgtctaccttccactcgttttgcgtacgcatcctgcgtcagcag
gcgcagctcgtgccggggcttaacagcaaattcaccatttatgacggcgacgacgcccgc
cggctattgggaatgatcgctaaagaaaagcagatcgatctcaagaagttcaccccgcgc
gtgctggccaaccagatttcgaactacaaaaacgagctcatcggccccgacgcggcggcg
caccgcgcgagtgagacgcgcaatcctttcgaccgcaccgtcgcggacgtgtacgcggat
taccagaagcgcctgcgcgcggcgaacgcggtggacttcgacgacctcatcggtgaggtc
gtgcgcatcttcgcggactacccgcaagtcacggagttctaccgcaagcgcttccgccac
gtgctcattgatgagtaccaggacaccaaccacgcccagtaccggctggtctccgagctg
gtcggccgcgggaacctcggcccagacgcgcccgagctgtgcgtggtgggcgactcggat
cagtccatctacgccttccgcggtgcgactatccgcaacatccaggagttcgagcgcgac
tacccgcaggcgcgcacgatcttgctggagcagaactaccgctcgacgcagacgattctg
gacgccgccaacgctgtcatcgcccgcaatgaaaaccgccgggagaaaaacctctggacc
gccaagggcagcggcgaccagatcgtcggctacgtggcggacaacgaacacgacgaggcg
cgatttatcgccaccgagatcgacgcgctggcggacaaagggaagccgtactcggacatc
gcggtgatgtaccggaccaacaatgcctcccgcgcgctggaagacatcttcatccgcacc
ggcatcccgtatcgcgtggtgggtggcacccgcttctacgagcggcgcgaaatccgcgac
atcgtcgcctacctgcgcatcctggacaacccggacgacacggtgagcctgcgccggatc
atcaacgtgcccaagcgcgccatcggggacaaagcgcaaggccacattgcggtgcacgca
gataacctaggcgtgagctttgggcgcgcgctggtggatgccgcggcgggcgacgtgccg
ggcctgggcacccgggcggtcaacgcggtgcgcaagttcaacgagatgatgcaggggata
gccaaccaggtgccggacatgcgcaactcggtgactgggcagcccgatctgggcgagctc
atcaacgccgtgctggatgcgacggggtaccgcgctgagctggaaaactccaacgacccg
caggacggctcgcgcctggacaacctgaacgagctggtctccgtcgcccgcgagttttcc
tccgaggcggccaaccagctggcggccagcgatatcgatcctgccgaggcggtcgaggag
ggcgaggccgcgccgggctcgctgcaggccttcttggaaaaggtctccctggtggcggac
gcggaccagatccccgattcggagaacggtgtggtcaccctcatgaccctgcacaccgcg
aagggtctggagttccccgtggtcttcctcaccggctgggaggacgggcagttcccgcac
atgcgcgcgctgggagacccgaaggagctctccgaggagcggcgcctggcttatgtgggg
atcacgcgcgcccgcgagaagctgtacctctcgcgggccatcatccgctcgtcgtggggc
aacccgctgaccaatcccgccagccgcttcctcggcgagatcccggaggatctcctcagc
tggcgcagggaggagccggatagctccctgtcggggtcggggtgggacgagccgtcctac
tcctacgggcgcaccttcggctcgtcctggtctgggtggggcggaaagtcgcggtcgtcg
cgctcgggggctcggtctggctccactgcgtcttcccctacgcagcggggccgaaaccgc
ggctcccgttccggcggcggtggcgccgggatgaagaactccaacttgcagctggcggtg
ggcgaccgtgtcaatcacgcgaagtacggtctgggcacggtcgtcgattgcagcggtagc
ggggctcgtgccaccgcgaccatcgacttcggcagcgccggaaccgtgcggctcatgctc
atcggcgggttgccgatggaaaagctctag
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